| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409483
Identifier: 41409483
GI number: 41409483
Start: 3759532
End: 3760446
Strand: Direct
Name: 41409483
Synonym: MAP3385
Alternate gene names: NA
Gene position: 3759532-3760446 (Clockwise)
Preceding gene: 41409482
Following gene: 41409484
Centisome position: 77.84
GC content: 73.66
Gene sequence:
>915_bases ATGGCGCGCACCGACGACGACACCTGGGACCTGGCCACCAGCGTGGGCGCGACCGCCACCATGGTGGCCGCCGGACGGGC CCGGGCCACCCGGGACGGCCTGATCGACGACCCGTTCGCCGAGCCGCTGGTGCGCGCCGTGGGCGTCGACTTCTTCACCC GGTGGGCCGCCGGCGAACTGGACGCCGCCGACGTCGACGTGCCCGGGGCGGCGTGGGGCATGCAGCGCATGACCGACATG CTCACTGCCCGCACCCGCTACATCGACGCGTTCTTCGCCGAGGCGGGCGCCGCGGGAATCCGACAGGTGGTGATCCTGGC CTCCGGCCTGGATGCCCGCGCCTACCGGCTGCCCTGGCCGGCGGGCACCACGGTGTTCGAGATCGACCAGCCGCGGGTGC TCGAGTTCAAGGCCGCCACCATCGCCCAGCTCGGCGCCGAGCCCACCGCGCCGGTGCGCGCCGTCGCGGTCGACCTGCGC CACGACTGGCCGTCGGCGCTGCGGCAGGCGGGCTTCGACGTCGGGCGCCCCGCCGCCTGGGCCGCCGAGGGGCTCCTCGG CTTCCTGCCGCCGCAGGCCCAGGATCGGTTGCTGGACAACGTCACCGCGCTGTCCGCCGACGGCAGCCAGTTGGTGGCCG AGGTCTTCGCCAACACCGGCGCCAGCGGGGACGCCTTGAATGCGGCCGGCGAAAAGTGGCGGCGGCACGGCCTGGACGTC GCCCTGGACGACCTGGGCTTCCCCGGCGAGCGCAACGACCCGGCCAGTTACCTGCAGCAGCTGGGCTGGCAGCCGGTGCG CACACCGCTGAACCAGATGCTGGCCAACAACGGGCTGCCGCTGCAGTCGACCGAGCCCGGCGCGCCGTTCGCCCAGAATT ACTACTGCACCGCGGTGCTGAACAAGGCAGGTTAG
Upstream 100 bases:
>100_bases CGCCCCGTGCGCGGCAGCCAGGGCGGGGGGCCGGGCGGCGGGATGCGCCCGGCCGCCGGTAGTTATTGTGGCTAACGGTA GAGCGGAAGGGGCTTCCTCG
Downstream 100 bases:
>100_bases GAACCCAACGCATGCCACACGAGACGCCGAACGGCAAGCCCCCCAAGCCCCTTGACGGATTCCGGGTGCTCGACTTCACC CAGAACATCGCCGGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MARTDDDTWDLATSVGATATMVAAGRARATRDGLIDDPFAEPLVRAVGVDFFTRWAAGELDAADVDVPGAAWGMQRMTDM LTARTRYIDAFFAEAGAAGIRQVVILASGLDARAYRLPWPAGTTVFEIDQPRVLEFKAATIAQLGAEPTAPVRAVAVDLR HDWPSALRQAGFDVGRPAAWAAEGLLGFLPPQAQDRLLDNVTALSADGSQLVAEVFANTGASGDALNAAGEKWRRHGLDV ALDDLGFPGERNDPASYLQQLGWQPVRTPLNQMLANNGLPLQSTEPGAPFAQNYYCTAVLNKAG
Sequences:
>Translated_304_residues MARTDDDTWDLATSVGATATMVAAGRARATRDGLIDDPFAEPLVRAVGVDFFTRWAAGELDAADVDVPGAAWGMQRMTDM LTARTRYIDAFFAEAGAAGIRQVVILASGLDARAYRLPWPAGTTVFEIDQPRVLEFKAATIAQLGAEPTAPVRAVAVDLR HDWPSALRQAGFDVGRPAAWAAEGLLGFLPPQAQDRLLDNVTALSADGSQLVAEVFANTGASGDALNAAGEKWRRHGLDV ALDDLGFPGERNDPASYLQQLGWQPVRTPLNQMLANNGLPLQSTEPGAPFAQNYYCTAVLNKAG >Mature_303_residues ARTDDDTWDLATSVGATATMVAAGRARATRDGLIDDPFAEPLVRAVGVDFFTRWAAGELDAADVDVPGAAWGMQRMTDML TARTRYIDAFFAEAGAAGIRQVVILASGLDARAYRLPWPAGTTVFEIDQPRVLEFKAATIAQLGAEPTAPVRAVAVDLRH DWPSALRQAGFDVGRPAAWAAEGLLGFLPPQAQDRLLDNVTALSADGSQLVAEVFANTGASGDALNAAGEKWRRHGLDVA LDDLGFPGERNDPASYLQQLGWQPVRTPLNQMLANNGLPLQSTEPGAPFAQNYYCTAVLNKAG
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3385_MYCPA (Q73UI3)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962319.1 - ProteinModelPortal: Q73UI3 - SMR: Q73UI3 - EnsemblBacteria: EBMYCT00000037502 - GeneID: 2721455 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3385 - NMPDR: fig|262316.1.peg.3385 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: GERNDPA - ProtClustDB: CLSK763694 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 32377; Mature: 32245
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: BINDING 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTDDDTWDLATSVGATATMVAAGRARATRDGLIDDPFAEPLVRAVGVDFFTRWAAGEL CCCCCCCHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DAADVDVPGAAWGMQRMTDMLTARTRYIDAFFAEAGAAGIRQVVILASGLDARAYRLPWP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEECCCC AGTTVFEIDQPRVLEFKAATIAQLGAEPTAPVRAVAVDLRHDWPSALRQAGFDVGRPAAW CCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHCCCCCCCCHHH AAEGLLGFLPPQAQDRLLDNVTALSADGSQLVAEVFANTGASGDALNAAGEKWRRHGLDV HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCE ALDDLGFPGERNDPASYLQQLGWQPVRTPLNQMLANNGLPLQSTEPGAPFAQNYYCTAVL EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE NKAG ECCC >Mature Secondary Structure ARTDDDTWDLATSVGATATMVAAGRARATRDGLIDDPFAEPLVRAVGVDFFTRWAAGEL CCCCCCHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DAADVDVPGAAWGMQRMTDMLTARTRYIDAFFAEAGAAGIRQVVILASGLDARAYRLPWP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEECCCC AGTTVFEIDQPRVLEFKAATIAQLGAEPTAPVRAVAVDLRHDWPSALRQAGFDVGRPAAW CCCEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHCCCCCCCCHHH AAEGLLGFLPPQAQDRLLDNVTALSADGSQLVAEVFANTGASGDALNAAGEKWRRHGLDV HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCE ALDDLGFPGERNDPASYLQQLGWQPVRTPLNQMLANNGLPLQSTEPGAPFAQNYYCTAVL EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE NKAG ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA