| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is manB
Identifier: 41409467
GI number: 41409467
Start: 3743717
End: 3745132
Strand: Reverse
Name: manB
Synonym: MAP3369c
Alternate gene names: 41409467
Gene position: 3745132-3743717 (Counterclockwise)
Preceding gene: 41409468
Following gene: 41409466
Centisome position: 77.54
GC content: 72.03
Gene sequence:
>1416_bases ATGTCCCGGCCCGCCGCGACTGTCCACCGTGTCGTCAAGGCGTACGACGTGCGTGGGCTGGTCGGCGAAGAGCTCGACCA GCCGCTGGTCGCCGACCTCGGCGCGGCCTTCGCCAAAGTGATGCGCGCCGAGGGCGCCGGCCAGGTCGTCATCGGCCACG ACATGCGCGACAGCTCACCCACCCTGGCCGCCGCGTTCGCCGCCGGGGTGACCGGGCAGGGTCTGGACGTGGTGCGCATC GGGCTGGCGTCCACCGATCAGCTCTACTTCGCCTCCGGCCTGCTGGACTGCCCCGGCGCGATGTTCACCGCGAGCCACAA CCCGGCGGCCTACAACGGGATCAAGCTGTGCCGCGCCGGCGCCCGGCCGGTCGGCGCCGACAGCGGGTTGCGCACCATCG CCGACGACGTGATCGCCGGCGTCGAGGACTACGACGGGCCACCGGGATCGGTCGGCGACCGCGACGTGCTGGCCGACTAC GGGCGGTTCCTGCGCTCGCTGGTAGACACCTCCGGGCTGCGCCCGCTGCGGGTCGCCGTCGACGCCGGCAACGGCATGGC CGGCCTCACCACACCCGCGGTGCTCGGCCCGATCGAGTCGATCACGTTGGCGCCCTTGTACTTCGAGCTCGACGGCTCCT TCCCGCACCACGAGGCCAACCCGCTGGACCCGGCCAACCTGGTCGACCTGCAGGCCTACGTGCGCGAGACCGGCGCCGAC ATCGGCCTGGCCTTCGACGGCGACGCCGATCGCTGCTTCGTGGTCGACGAGCGCGGCAACCCGGTGTCGCCGTCGACCGT GACCAGCCTGGTGGCCGCCCGCGAACTCGGCCGCGAGATCGGCGCGACGATCATCCACAACGTGATCACCTCGCGCGCGG TGCCCGAGCTGGTCAGCGAGCGCGGCGGCACACCGCTGCGCTCGCGGGTGGGGCACTCCTACATCAAGGCGCTGATGGCC GACACCGGCGCGATCTTCGGCGGCGAGCACTCGGCGCACTACTACTTCCGCGACTTCTGGGGCGCCGACTCGGGGATGCT GGCCGCGCTGTACGTGCTGGCCGCCCTCGGCGAACAGGACCGCCCGCTGTCCGAGCTGACCGCGGACTACCAGCGCTACG AGTCGTCCGGCGAGATCAACTTCACCGTCGCCGACGCCGGGCAGTGCACCGAAGCGGTGCTGAGGTCGTTCGGCACCCGG ATCCACTCCCTGGACCACGTGGACGGGGTGACCGTGGACCTGGGCGACGGCAGCTGGTTCAACCTGCGCAGCTCCAACAC CGAACCGCTGCTGCGGCTCAACGTGGAGGGCCGCACGGCAGAGGACGTCGCCGCGGTGGTCGCCCAGATCAGCGCCGAGA TCGCCGCGATCACCGCGGGAACGACGACCGAGGCGGACGCGGGGGCGGCGCCGTGA
Upstream 100 bases:
>100_bases CCGATGGGGGCGCACCCGAATCCGCGCGCACCGCGGCGGCCGGTGTTCTCCCCGGCCCGATAGGCTGGCGGCCAAGAGTT CACGTCGTCAGGAGTCCCGC
Downstream 100 bases:
>100_bases ACGCCACCCGCGCAATCGATCTGGAGGACACCGAGGGCCTGCTGAGCGCCGACCGCGACGGCCTGCTGCGGGCCGCGTCG TCGGCCGGCGCGCAGGTGCG
Product: phosphomannomutase/phosphoglucomutase
Products: NA
Alternate protein names: Phosphoglucomutase; PGM; Glucose phosphomutase; Phosphomannomutase; PMM [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSRPAATVHRVVKAYDVRGLVGEELDQPLVADLGAAFAKVMRAEGAGQVVIGHDMRDSSPTLAAAFAAGVTGQGLDVVRI GLASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKLCRAGARPVGADSGLRTIADDVIAGVEDYDGPPGSVGDRDVLADY GRFLRSLVDTSGLRPLRVAVDAGNGMAGLTTPAVLGPIESITLAPLYFELDGSFPHHEANPLDPANLVDLQAYVRETGAD IGLAFDGDADRCFVVDERGNPVSPSTVTSLVAARELGREIGATIIHNVITSRAVPELVSERGGTPLRSRVGHSYIKALMA DTGAIFGGEHSAHYYFRDFWGADSGMLAALYVLAALGEQDRPLSELTADYQRYESSGEINFTVADAGQCTEAVLRSFGTR IHSLDHVDGVTVDLGDGSWFNLRSSNTEPLLRLNVEGRTAEDVAAVVAQISAEIAAITAGTTTEADAGAAP
Sequences:
>Translated_471_residues MSRPAATVHRVVKAYDVRGLVGEELDQPLVADLGAAFAKVMRAEGAGQVVIGHDMRDSSPTLAAAFAAGVTGQGLDVVRI GLASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKLCRAGARPVGADSGLRTIADDVIAGVEDYDGPPGSVGDRDVLADY GRFLRSLVDTSGLRPLRVAVDAGNGMAGLTTPAVLGPIESITLAPLYFELDGSFPHHEANPLDPANLVDLQAYVRETGAD IGLAFDGDADRCFVVDERGNPVSPSTVTSLVAARELGREIGATIIHNVITSRAVPELVSERGGTPLRSRVGHSYIKALMA DTGAIFGGEHSAHYYFRDFWGADSGMLAALYVLAALGEQDRPLSELTADYQRYESSGEINFTVADAGQCTEAVLRSFGTR IHSLDHVDGVTVDLGDGSWFNLRSSNTEPLLRLNVEGRTAEDVAAVVAQISAEIAAITAGTTTEADAGAAP >Mature_470_residues SRPAATVHRVVKAYDVRGLVGEELDQPLVADLGAAFAKVMRAEGAGQVVIGHDMRDSSPTLAAAFAAGVTGQGLDVVRIG LASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKLCRAGARPVGADSGLRTIADDVIAGVEDYDGPPGSVGDRDVLADYG RFLRSLVDTSGLRPLRVAVDAGNGMAGLTTPAVLGPIESITLAPLYFELDGSFPHHEANPLDPANLVDLQAYVRETGADI GLAFDGDADRCFVVDERGNPVSPSTVTSLVAARELGREIGATIIHNVITSRAVPELVSERGGTPLRSRVGHSYIKALMAD TGAIFGGEHSAHYYFRDFWGADSGMLAALYVLAALGEQDRPLSELTADYQRYESSGEINFTVADAGQCTEAVLRSFGTRI HSLDHVDGVTVDLGDGSWFNLRSSNTEPLLRLNVEGRTAEDVAAVVAQISAEIAAITAGTTTEADAGAAP
Specific function: Involved in xanthan production [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=438, Percent_Identity=38.5844748858447, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI1789566, Length=451, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2; =5.4.2.8 [H]
Molecular weight: Translated: 49268; Mature: 49136
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAATVHRVVKAYDVRGLVGEELDQPLVADLGAAFAKVMRAEGAGQVVIGHDMRDSSP CCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC TLAAAFAAGVTGQGLDVVRIGLASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKLCRAG HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCEEECCCCCCHHCHHHHHHCC ARPVGADSGLRTIADDVIAGVEDYDGPPGSVGDRDVLADYGRFLRSLVDTSGLRPLRVAV CCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE DAGNGMAGLTTPAVLGPIESITLAPLYFELDGSFPHHEANPLDPANLVDLQAYVRETGAD ECCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC IGLAFDGDADRCFVVDERGNPVSPSTVTSLVAARELGREIGATIIHNVITSRAVPELVSE EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGTPLRSRVGHSYIKALMADTGAIFGGEHSAHYYFRDFWGADSGMLAALYVLAALGEQD CCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHCCCCCHHHHHHHHHHHHCCCC RPLSELTADYQRYESSGEINFTVADAGQCTEAVLRSFGTRIHSLDHVDGVTVDLGDGSWF CCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEE NLRSSNTEPLLRLNVEGRTAEDVAAVVAQISAEIAAITAGTTTEADAGAAP EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC >Mature Secondary Structure SRPAATVHRVVKAYDVRGLVGEELDQPLVADLGAAFAKVMRAEGAGQVVIGHDMRDSSP CCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC TLAAAFAAGVTGQGLDVVRIGLASTDQLYFASGLLDCPGAMFTASHNPAAYNGIKLCRAG HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCEEECCCCCCHHCHHHHHHCC ARPVGADSGLRTIADDVIAGVEDYDGPPGSVGDRDVLADYGRFLRSLVDTSGLRPLRVAV CCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE DAGNGMAGLTTPAVLGPIESITLAPLYFELDGSFPHHEANPLDPANLVDLQAYVRETGAD ECCCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC IGLAFDGDADRCFVVDERGNPVSPSTVTSLVAARELGREIGATIIHNVITSRAVPELVSE EEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGTPLRSRVGHSYIKALMADTGAIFGGEHSAHYYFRDFWGADSGMLAALYVLAALGEQD CCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHCCCCCHHHHHHHHHHHHCCCC RPLSELTADYQRYESSGEINFTVADAGQCTEAVLRSFGTRIHSLDHVDGVTVDLGDGSWF CCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEE NLRSSNTEPLLRLNVEGRTAEDVAAVVAQISAEIAAITAGTTTEADAGAAP EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280 [H]