| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409454
Identifier: 41409454
GI number: 41409454
Start: 3726943
End: 3727584
Strand: Reverse
Name: 41409454
Synonym: MAP3356c
Alternate gene names: NA
Gene position: 3727584-3726943 (Counterclockwise)
Preceding gene: 41409455
Following gene: 41409453
Centisome position: 77.18
GC content: 78.82
Gene sequence:
>642_bases ATGCTCGACCTGTTCCTGCCGGCCGAATGCGGCGGCTGCGCGGCGCCGGCGACCCGCTGGTGCCCGGCCTGCGCGGCGGA GCTGGTCGTCAAACCCGACGAACCGCACGTGGTGAACCCGCGCGTCGACCCGGGCGTCCCGGTGTTCGCGCTCGGCCGCT ACGCCAACACCCGCCGGCGCGCCCTCCTGGCGCTCAAGGAACACGGCCGCGCCGACCTCGTCGCGCCGCTGGCGGGCGCC CTGGCCGTCGCGGTGCACCGGCTGCTGTGCTGGGGCATCGTCGCCACCCCGCTGACCGTCGTGCCGGCGCCCACCCGACG GTCGGCCGCGCGCCGCCGCGGCGGCGATCCCGTCACCCGGCTGGCGCGCGCCGCGGTGGCCCGCCATCCCGACATCGCCG TCGCCTCGGTGTTGCGGATCCGGGCGCTCACCCGCGACTCGGTGGGGCTGGGCACCGCCGAGCGGGAACGCAACATCGCC GGCCGGGTGGTGCTGCGGGGCCGGCCCGCGCCGCTGCCGGGCGCCGACGTCCTGGTCGTCGACGACGTCGTCACCACCGG GGCGACGGCGCGCGAGTCGGTGCGCGTCCTGCACGCGGCAGGGGCCCGGGTCGCCGCCGTGCTGGCGATCGCGGCGGCGT GA
Upstream 100 bases:
>100_bases GTTCGAGACGCCCCGCCCCAAAAAATCCCCTAATTCAGCAGGCTCCTAGCGGCGATCGCTAGCGGCGCCACCTGTCACCC CCGCCCGCCACACTGGCGGC
Downstream 100 bases:
>100_bases ATCGCGATGTGAAGAACACGCAACAGCTCGACGAAATTAGTGGCATCGGCAGCCGAACACGAGCTAACGTCGAGGACAAC ATCATCGACTCTGGTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLDLFLPAECGGCAAPATRWCPACAAELVVKPDEPHVVNPRVDPGVPVFALGRYANTRRRALLALKEHGRADLVAPLAGA LAVAVHRLLCWGIVATPLTVVPAPTRRSAARRRGGDPVTRLARAAVARHPDIAVASVLRIRALTRDSVGLGTAERERNIA GRVVLRGRPAPLPGADVLVVDDVVTTGATARESVRVLHAAGARVAAVLAIAAA
Sequences:
>Translated_213_residues MLDLFLPAECGGCAAPATRWCPACAAELVVKPDEPHVVNPRVDPGVPVFALGRYANTRRRALLALKEHGRADLVAPLAGA LAVAVHRLLCWGIVATPLTVVPAPTRRSAARRRGGDPVTRLARAAVARHPDIAVASVLRIRALTRDSVGLGTAERERNIA GRVVLRGRPAPLPGADVLVVDDVVTTGATARESVRVLHAAGARVAAVLAIAAA >Mature_213_residues MLDLFLPAECGGCAAPATRWCPACAAELVVKPDEPHVVNPRVDPGVPVFALGRYANTRRRALLALKEHGRADLVAPLAGA LAVAVHRLLCWGIVATPLTVVPAPTRRSAARRRGGDPVTRLARAAVARHPDIAVASVLRIRALTRDSVGLGTAERERNIA GRVVLRGRPAPLPGADVLVVDDVVTTGATARESVRVLHAAGARVAAVLAIAAA
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22175; Mature: 22175
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLFLPAECGGCAAPATRWCPACAAELVVKPDEPHVVNPRVDPGVPVFALGRYANTRRR CCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCEECCCCCCCCCEEECCCHHHHHHH ALLALKEHGRADLVAPLAGALAVAVHRLLCWGIVATPLTVVPAPTRRSAARRRGGDPVTR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHHHH LARAAVARHPDIAVASVLRIRALTRDSVGLGTAERERNIAGRVVLRGRPAPLPGADVLVV HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEE DDVVTTGATARESVRVLHAAGARVAAVLAIAAA CCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MLDLFLPAECGGCAAPATRWCPACAAELVVKPDEPHVVNPRVDPGVPVFALGRYANTRRR CCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCEECCCCCCCCCEEECCCHHHHHHH ALLALKEHGRADLVAPLAGALAVAVHRLLCWGIVATPLTVVPAPTRRSAARRRGGDPVTR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHHHH LARAAVARHPDIAVASVLRIRALTRDSVGLGTAERERNIAGRVVLRGRPAPLPGADVLVV HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEE DDVVTTGATARESVRVLHAAGARVAAVLAIAAA CCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA