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The map label for this gene is 41409453

Identifier: 41409453

GI number: 41409453

Start: 3725967

End: 3726662

Strand: Reverse

Name: 41409453

Synonym: MAP3355c

Alternate gene names: NA

Gene position: 3726662-3725967 (Counterclockwise)

Preceding gene: 41409454

Following gene: 41409452

Centisome position: 77.16

GC content: 67.82

Gene sequence:

>696_bases
ATGTCAAGGCTATCCGTGGATTCCGGTCAGATTCTGGACCAGTCGTCGCCCAGCACCGACGGGCAAGGCCAACCGACGGC
CACCGCCGAAGTCGTGTTCAAGGGCCGCAACGTAGAAATCCCCGATCACTACCGTCTGTACGTCTCGCAAAAACTCGCCC
GCCTCGAGCGGTTCGACCGCTCGATCTATCTCTTCGACGTCGAACTCAAGCACGCGCCCAACCGGCGGCAGCGCAAGTCC
TGTCAACGGGTGGAGATCACCGCCCGTGGCCGCGGCCCCGTCAGCCGGGCGGAGGCCTGCGCCGACAGCTTCTACGCCGC
CTTCGAGTCCGCGGTCGACAAGCTGGAGAACCGGCTGCGCCGCGTCAAGGATCGCCGCAAGGTGCACTACGGCGACAAGA
CCCCGGTCTCGCTGGCCGCCGCCACCGCGGTGCCCCCGCACGCGCCGCTGCCCAGCGAGCCGCAGCCGGCGGCCGACCAT
GACGGCGTGGAGCCCGACACCGAGCTCGACCGGGAGCCCGGGCGCATCGTGCGCACCAAGGAGCACCCGGCCATCCCGAT
GACGGTCGACGACGCGCTCTACGAAATGGAACTCGTCGGGCGCGACTTCTTTCTCTTCCAGGACAAGCAGACCGAACGGC
CCTGTGTGGTCTACCGCCGGCACGCCTACGACTACGGCCTGATCCGCCTGGCCTGA

Upstream 100 bases:

>100_bases
GGCGGTAGCCAGTCTCGAACCGCTCTCACCTCGTCGGCGCATCACATCAGCCGGGCACGCAGGGCGCGTGCGACGTGAAA
AGAGAAACGAGTTGTCACGT

Downstream 100 bases:

>100_bases
CTGATCCCGTCGTCCGCCGAACGTCGACTCTATTGCGCGATTTCGGGCGAATCCGCACCACGAGTCGACGTTCGGCGTCC
AAAGAGCGACGTCACCTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDRSIYLFDVELKHAPNRRQRKS
CQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLRRVKDRRKVHYGDKTPVSLAAATAVPPHAPLPSEPQPAADH
DGVEPDTELDREPGRIVRTKEHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA

Sequences:

>Translated_231_residues
MSRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDRSIYLFDVELKHAPNRRQRKS
CQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLRRVKDRRKVHYGDKTPVSLAAATAVPPHAPLPSEPQPAADH
DGVEPDTELDREPGRIVRTKEHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA
>Mature_230_residues
SRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDRSIYLFDVELKHAPNRRQRKSC
QRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLRRVKDRRKVHYGDKTPVSLAAATAVPPHAPLPSEPQPAADHD
GVEPDTELDREPGRIVRTKEHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 26218; Mature: 26087

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
SIYLFDVELKHAPNRRQRKSCQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLR
EEEEEEEEECCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKDRRKVHYGDKTPVSLAAATAVPPHAPLPSEPQPAADHDGVEPDTELDREPGRIVRTK
HHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
EHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA
CCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
SRLSVDSGQILDQSSPSTDGQGQPTATAEVVFKGRNVEIPDHYRLYVSQKLARLERFDR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
SIYLFDVELKHAPNRRQRKSCQRVEITARGRGPVSRAEACADSFYAAFESAVDKLENRLR
EEEEEEEEECCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKDRRKVHYGDKTPVSLAAATAVPPHAPLPSEPQPAADHDGVEPDTELDREPGRIVRTK
HHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
EHPAIPMTVDDALYEMELVGRDFFLFQDKQTERPCVVYRRHAYDYGLIRLA
CCCCCCEEHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]