Click here to switch to the map view.

The map label for this gene is 41409434

Identifier: 41409434

GI number: 41409434

Start: 3705565

End: 3706035

Strand: Reverse

Name: 41409434

Synonym: MAP3336c

Alternate gene names: NA

Gene position: 3706035-3705565 (Counterclockwise)

Preceding gene: 41409437

Following gene: 41409431

Centisome position: 76.73

GC content: 68.15

Gene sequence:

>471_bases
CTGCTGCAGGGGCCGCTGGCCGACCGCGATGCCTGGTCGGCAGTGGGGGAGTGCGCGATCGAGAAGACGATGGCCGTCGT
CGGCACCAAGTCCGCGATGCTGATCATGCGCGAGGCGTACTACGGCACCACCCGGTTCGACGACTTCGCCCGGCGGGTGG
GCATTACCAAGGCGGCCACTTCCGCGCGGCTGGCGGAGCTGGTCGAGCTCGGGCTGCTGAAACGGCGGCCGTATCGGGAA
CCCGGGCAGCGCAGCCGCGACGAGTACGTGCTCACCCAGGCCGGAATCGACTTCATGCCGGTGGTGTGGGCGATGTTCGA
GTGGGGCCGGCGTCATCTGCCGGGGCGTCACCGGTTGCAGCTGACCCACGTGGGCTGCGGCGCCGAGGTCGGCGTCGAAA
TCCGTTGCGCCGAAGGGCATTTGGTGCCGCCCGACGAACTGGGTATGCGGTTGGCTAAGAATTCTGGTTGA

Upstream 100 bases:

>100_bases
GGCTCCTCCTCGAGTCCAGGTCTGGATATATTCGACTGTACTCAGATACGCACCTCGGTATGCTTAAAGCAACTCAGCCG
AGGAGGTGATTTGTATGACA

Downstream 100 bases:

>100_bases
GCGCGTCCAGCAGCCGTCGGGCGGCGGCGACGCGGCGGGCGGCGGGTCCGGTCAGCGTGTCCAGGGCGCATTCGGGGTCG
GCGGGCGGTCCCATGTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDDFARRVGITKAATSARLAELVELGLLKRRPYRE
PGQRSRDEYVLTQAGIDFMPVVWAMFEWGRRHLPGRHRLQLTHVGCGAEVGVEIRCAEGHLVPPDELGMRLAKNSG

Sequences:

>Translated_156_residues
MLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDDFARRVGITKAATSARLAELVELGLLKRRPYRE
PGQRSRDEYVLTQAGIDFMPVVWAMFEWGRRHLPGRHRLQLTHVGCGAEVGVEIRCAEGHLVPPDELGMRLAKNSG
>Mature_156_residues
MLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDDFARRVGITKAATSARLAELVELGLLKRRPYRE
PGQRSRDEYVLTQAGIDFMPVVWAMFEWGRRHLPGRHRLQLTHVGCGAEVGVEIRCAEGHLVPPDELGMRLAKNSG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17370; Mature: 17370

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDDFARRVGITKAAT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
SARLAELVELGLLKRRPYREPGQRSRDEYVLTQAGIDFMPVVWAMFEWGRRHLPGRHRLQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTHVGCGAEVGVEIRCAEGHLVPPDELGMRLAKNSG
EEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDDFARRVGITKAAT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
SARLAELVELGLLKRRPYREPGQRSRDEYVLTQAGIDFMPVVWAMFEWGRRHLPGRHRLQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTHVGCGAEVGVEIRCAEGHLVPPDELGMRLAKNSG
EEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]