| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409370
Identifier: 41409370
GI number: 41409370
Start: 3632368
End: 3632784
Strand: Direct
Name: 41409370
Synonym: MAP3272
Alternate gene names: NA
Gene position: 3632368-3632784 (Clockwise)
Preceding gene: 41409367
Following gene: 41409372
Centisome position: 75.21
GC content: 69.54
Gene sequence:
>417_bases ATGCCGGCGACCGATGACGGGGTGGAGATCCTGCCGGTGCGCGAGTGCTGGGATCTGCTGCGCGGCCTGACGCTGGGCCG GCTGGTCACCCACGCCGACGGTCAGCCCGACATCTTCCCGGTCAACTACGTCGTGCAGCGCCGCACCGTGCTGTTCCGCA CCGCGGAGGGCACCAAGCTGATCAGCGCGGCGATCAACAACCGGGTGCTGTTCGAGGTCGACGACCACAACGTCGTCGGG GCGTGGAGCGTGATCATCCGGGGCATCGCCCGCTCGCTGCGCACTCCCGAGGAGATCGAGGAGGCCGAGCGCGCGCAGGT GCTGCCGTGGACCAGGTCGGAGAAGACGCACTACGTACGCATCGTTCCCGAGAGCGTCACCGGCCGCCGCTTCCGGTTCG GGTCACCGGCGGGCTGA
Upstream 100 bases:
>100_bases CCGCACCGACACGGGGCCGGCCAATAGTGTTGCGGCAGTGACCCATTGCGGCAGTGATTCATTGCGGCTCAACACCGCGG GCGCGGAAAGGGACGAAGCG
Downstream 100 bases:
>100_bases TCAGCCGACCCACTCGACGAAGTCGGCGAGGTCGCGGCGCGGGGTCGCCGGCAACGGGTCCGCGTTGATCGGCGCCCAAC CCACCCGCAGCAGCATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPATDDGVEILPVRECWDLLRGLTLGRLVTHADGQPDIFPVNYVVQRRTVLFRTAEGTKLISAAINNRVLFEVDDHNVVG AWSVIIRGIARSLRTPEEIEEAERAQVLPWTRSEKTHYVRIVPESVTGRRFRFGSPAG
Sequences:
>Translated_138_residues MPATDDGVEILPVRECWDLLRGLTLGRLVTHADGQPDIFPVNYVVQRRTVLFRTAEGTKLISAAINNRVLFEVDDHNVVG AWSVIIRGIARSLRTPEEIEEAERAQVLPWTRSEKTHYVRIVPESVTGRRFRFGSPAG >Mature_137_residues PATDDGVEILPVRECWDLLRGLTLGRLVTHADGQPDIFPVNYVVQRRTVLFRTAEGTKLISAAINNRVLFEVDDHNVVGA WSVIIRGIARSLRTPEEIEEAERAQVLPWTRSEKTHYVRIVPESVTGRRFRFGSPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15548; Mature: 15417
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATDDGVEILPVRECWDLLRGLTLGRLVTHADGQPDIFPVNYVVQRRTVLFRTAEGTKL CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEEEEEEEECCCCHH ISAAINNRVLFEVDDHNVVGAWSVIIRGIARSLRTPEEIEEAERAQVLPWTRSEKTHYVR HHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEE IVPESVTGRRFRFGSPAG EECCCCCCCEEECCCCCC >Mature Secondary Structure PATDDGVEILPVRECWDLLRGLTLGRLVTHADGQPDIFPVNYVVQRRTVLFRTAEGTKL CCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHEEEEEEEEEECCCCHH ISAAINNRVLFEVDDHNVVGAWSVIIRGIARSLRTPEEIEEAERAQVLPWTRSEKTHYVR HHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEE IVPESVTGRRFRFGSPAG EECCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12218036; 9634230 [H]