Click here to switch to the map view.

The map label for this gene is hsp18_3

Identifier: 41409366

GI number: 41409366

Start: 3628554

End: 3628997

Strand: Direct

Name: hsp18_3

Synonym: MAP3268

Alternate gene names: NA

Gene position: 3628554-3628997 (Clockwise)

Preceding gene: 41409363

Following gene: 41409367

Centisome position: 75.13

GC content: 69.14

Gene sequence:

>444_bases
ATGCTGATGCGTTCGGACCCGTTCCGCGAACTCGACCGACTGACCAACCAGGTCCTGGGCACCGCCACCCGGCCGGCGGT
GATGCCGATGGACGCCTGGCGGGAAGGCGAGCACTTCGTGGTCGAATTCGACCTGCCCGGTATCGATGCCGAGTCGCTGG
ACATCGACATCGAGCGCAATGTGTTGACCGTGCGCGCCGAAAGGCCGGCCCTCGACCCCAGCCGCGAGATGCTGGCCACC
GAGCGGCCGCGCGGCGTGTTCAGCCGCGAGCTGGTGCTCGGCGACAACCTCGACACCGACAAGATCGAGGCCTCGTACCG
CGACGGCGTGCTGAGCCTGCACATCCCGGTGGCCGAGAAGGCCAAGCCGCGCAAGATCGCCGTCGGCCGCGGCGAGGCAC
CCCGGGCCGTCACCGAAACCGCGCGAGAGGTCGTCAACGCCTGA

Upstream 100 bases:

>100_bases
ACAGTTGCGTCATATTGTCGAGGATGATATATCAAATCTATATTGTTAGACATAGAAAACCACATACACGTCACCTAGAT
CACACTGAGGGGTGAACATC

Downstream 100 bases:

>100_bases
CCGCCCGGAGGCGGGCGGCGGCCGCACGCGCCAGGCGCTTTCGCGCGCCCGTCGCCCGCCTGCGGCTCCAGGGCTCGGGC
GTGCACCTCTCGCCCGGTGA

Product: Hsp18_3

Products: NA

Alternate protein names: Clone MAVC124 [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLMRSDPFRELDRLTNQVLGTATRPAVMPMDAWREGEHFVVEFDLPGIDAESLDIDIERNVLTVRAERPALDPSREMLAT
ERPRGVFSRELVLGDNLDTDKIEASYRDGVLSLHIPVAEKAKPRKIAVGRGEAPRAVTETAREVVNA

Sequences:

>Translated_147_residues
MLMRSDPFRELDRLTNQVLGTATRPAVMPMDAWREGEHFVVEFDLPGIDAESLDIDIERNVLTVRAERPALDPSREMLAT
ERPRGVFSRELVLGDNLDTDKIEASYRDGVLSLHIPVAEKAKPRKIAVGRGEAPRAVTETAREVVNA
>Mature_147_residues
MLMRSDPFRELDRLTNQVLGTATRPAVMPMDAWREGEHFVVEFDLPGIDAESLDIDIERNVLTVRAERPALDPSREMLAT
ERPRGVFSRELVLGDNLDTDKIEASYRDGVLSLHIPVAEKAKPRKIAVGRGEAPRAVTETAREVVNA

Specific function: Not known. This protein is one of the major immune reactive proteins in mycobacteria [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16433; Mature: 16433

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRSDPFRELDRLTNQVLGTATRPAVMPMDAWREGEHFVVEFDLPGIDAESLDIDIERN
CCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHCCCCCEEEEEECCCCCCCCCEEEEECCC
VLTVRAERPALDPSREMLATERPRGVFSRELVLGDNLDTDKIEASYRDGVLSLHIPVAEK
EEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCHHEHHHCCCCEEEEECCCCCC
AKPRKIAVGRGEAPRAVTETAREVVNA
CCCCEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLMRSDPFRELDRLTNQVLGTATRPAVMPMDAWREGEHFVVEFDLPGIDAESLDIDIERN
CCCCCCCHHHHHHHHHHHHCCCCCCEECCHHHCCCCCEEEEEECCCCCCCCCEEEEECCC
VLTVRAERPALDPSREMLATERPRGVFSRELVLGDNLDTDKIEASYRDGVLSLHIPVAEK
EEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCHHEHHHCCCCEEEEECCCCCC
AKPRKIAVGRGEAPRAVTETAREVVNA
CCCCEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8454357 [H]