| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409348
Identifier: 41409348
GI number: 41409348
Start: 3606545
End: 3607546
Strand: Direct
Name: 41409348
Synonym: MAP3250
Alternate gene names: NA
Gene position: 3606545-3607546 (Clockwise)
Preceding gene: 41409347
Following gene: 41409349
Centisome position: 74.67
GC content: 75.55
Gene sequence:
>1002_bases GTGAGGCACGACGACTACACGCTGGTGATACCCACGGTGGGGCGGGAATCGTTGCACCGCTTGCTGATTGCGCTGCGCTC GAGCATGGGTCCGCAGCCGCCGGAGGTTGTGGTGGTCGACGACCGGCCCCGCCCGGGCGACGATCTGCCGCTGCCGGACG ACCCGCCGGTGCGGGTGTTGCGCAGCGGCGGGCGCGGACCGGCGGCCGCCCGCAACGTCGGCTGGCGCGCCAGCCGCACC CGCTGGGTGTGCTTCCTGGACGACGACGTGCTGCCCGACCGCGACTGGATATCGGCGTTGTGCCTCGACCTGAAGGCCGC CGACGCGTGCGGCGCCGCCGGCTCCCAGGCGGTGCTCGAGGTGCCGACACCGCGGCGGCCCAGCGACGACCAACGCCGGA CCGCGCGGCTGGCCACCGCGCAATGGATCACCGCGGACATGGCCTATCGCCGCGACATTCTGGTCGCCGCAGGAGGTTTC GACGAGCGGTTCCCCCGCGCCTACCGGGAGGACTCCGACCTGGCGCTGCGGATCGTGTCGGCCGGCGGAACCATCCTGCG CGGCGAGCGTCGCTGCACCCACCCGGTGGCGCCGGCGACCTGGCGCTCGAGCGTGCGGGCCCAGATCGGCAACCGCGACA ACGCGCTGATGCGGCGCAAGCACGGCCGCCGCTGGCGGACCCGGATCGGCGAGGGACCCGGCCGGATGCCGGCGCACGCG GCCACCACCGCGGCCGGCGCCGTCGCGCTGCTGGCCGGGCTGCTGGGCCGGCGCGCCACCGCCCGCCGCGCCGCCGCGCT GTGGCTGCTGTGCACGATCGAGTTCGCGGCGCGGCGCTGGCTCAGCGGGCCGCGCAATGTGCGTGAGGCACTTGGCCTTT CGGCCAGCAGCGTGCTCATCCCGCCGGTCGCGGTGGCGCACCGGCTGGCCGGGGAATGGACCTTCGGCGCGCGCGTCCCG AGCCGCCGCTGGCCGTGCTGCTGGACCGCGACGACACCCTGA
Upstream 100 bases:
>100_bases GACGGCCCATGGTGGACACCCCGCGCGACGCCCTCGAGGTATTCGGCAGCTCCCCGATCGACGTGCTGGCCGTCGGCCCC TACCTGGTCAGGCGGTATCT
Downstream 100 bases:
>100_bases TCGTCGACCGGCCCTACCTCAACGACCCCGCGGGCGTGCGGCCCACCCACGACGCCGCCAAGGCGCTGACCCGGCTGCGC CGCCGCGGCCTGCTGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Transferase; HAD-Superfamily Hydrolase Subfamily IIIA; Hydrolase HAD-Superfamily Subfamily IIIA; Glycosyltransferase; Membrane-Anchored Glycosyltransferase; Histidinol-Phosphate Phosphatase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MRHDDYTLVIPTVGRESLHRLLIALRSSMGPQPPEVVVVDDRPRPGDDLPLPDDPPVRVLRSGGRGPAAARNVGWRASRT RWVCFLDDDVLPDRDWISALCLDLKAADACGAAGSQAVLEVPTPRRPSDDQRRTARLATAQWITADMAYRRDILVAAGGF DERFPRAYREDSDLALRIVSAGGTILRGERRCTHPVAPATWRSSVRAQIGNRDNALMRRKHGRRWRTRIGEGPGRMPAHA ATTAAGAVALLAGLLGRRATARRAAALWLLCTIEFAARRWLSGPRNVREALGLSASSVLIPPVAVAHRLAGEWTFGARVP SRRWPCCWTATTP
Sequences:
>Translated_333_residues MRHDDYTLVIPTVGRESLHRLLIALRSSMGPQPPEVVVVDDRPRPGDDLPLPDDPPVRVLRSGGRGPAAARNVGWRASRT RWVCFLDDDVLPDRDWISALCLDLKAADACGAAGSQAVLEVPTPRRPSDDQRRTARLATAQWITADMAYRRDILVAAGGF DERFPRAYREDSDLALRIVSAGGTILRGERRCTHPVAPATWRSSVRAQIGNRDNALMRRKHGRRWRTRIGEGPGRMPAHA ATTAAGAVALLAGLLGRRATARRAAALWLLCTIEFAARRWLSGPRNVREALGLSASSVLIPPVAVAHRLAGEWTFGARVP SRRWPCCWTATTP >Mature_333_residues MRHDDYTLVIPTVGRESLHRLLIALRSSMGPQPPEVVVVDDRPRPGDDLPLPDDPPVRVLRSGGRGPAAARNVGWRASRT RWVCFLDDDVLPDRDWISALCLDLKAADACGAAGSQAVLEVPTPRRPSDDQRRTARLATAQWITADMAYRRDILVAAGGF DERFPRAYREDSDLALRIVSAGGTILRGERRCTHPVAPATWRSSVRAQIGNRDNALMRRKHGRRWRTRIGEGPGRMPAHA ATTAAGAVALLAGLLGRRATARRAAALWLLCTIEFAARRWLSGPRNVREALGLSASSVLIPPVAVAHRLAGEWTFGARVP SRRWPCCWTATTP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36561; Mature: 36561
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHDDYTLVIPTVGRESLHRLLIALRSSMGPQPPEVVVVDDRPRPGDDLPLPDDPPVRVL CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH RSGGRGPAAARNVGWRASRTRWVCFLDDDVLPDRDWISALCLDLKAADACGAAGSQAVLE HCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE VPTPRRPSDDQRRTARLATAQWITADMAYRRDILVAAGGFDERFPRAYREDSDLALRIVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHCCHHHCCCCCEEEEEEE AGGTILRGERRCTHPVAPATWRSSVRAQIGNRDNALMRRKHGRRWRTRIGEGPGRMPAHA CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHH ATTAAGAVALLAGLLGRRATARRAAALWLLCTIEFAARRWLSGPRNVREALGLSASSVLI HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEC PPVAVAHRLAGEWTFGARVPSRRWPCCWTATTP CHHHHHHHHCCCCEECCCCCCCCCCEEECCCCC >Mature Secondary Structure MRHDDYTLVIPTVGRESLHRLLIALRSSMGPQPPEVVVVDDRPRPGDDLPLPDDPPVRVL CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH RSGGRGPAAARNVGWRASRTRWVCFLDDDVLPDRDWISALCLDLKAADACGAAGSQAVLE HCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE VPTPRRPSDDQRRTARLATAQWITADMAYRRDILVAAGGFDERFPRAYREDSDLALRIVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHCCHHHCCCCCEEEEEEE AGGTILRGERRCTHPVAPATWRSSVRAQIGNRDNALMRRKHGRRWRTRIGEGPGRMPAHA CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHH ATTAAGAVALLAGLLGRRATARRAAALWLLCTIEFAARRWLSGPRNVREALGLSASSVLI HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEC PPVAVAHRLAGEWTFGARVPSRRWPCCWTATTP CHHHHHHHHCCCCEECCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA