| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yceI [C]
Identifier: 41409297
GI number: 41409297
Start: 3550059
End: 3550595
Strand: Direct
Name: yceI [C]
Synonym: MAP3199
Alternate gene names: 41409297
Gene position: 3550059-3550595 (Clockwise)
Preceding gene: 41409296
Following gene: 41409298
Centisome position: 73.5
GC content: 66.29
Gene sequence:
>537_bases ATGACGACCTTGGAGACACTGCTGCACGATCCGGAGATGGCCGGCGTGTGGAACCTGGTGCCGGACCGCTCGGCCATCAC TTTCAGGATCAAGAACATGTGGGGGCTGCTGACCGTCCGGGGCCGCTTCACCGACTTCACCGGTGACGGCCAACTGACCG GCAAGGGAGCGGTTTTCGGGCGCGTCGACATCCGGGCCGCGTCGCTGGACACCGGGATCGGCCGCCGCGACCAGCACCTG CGCTCGCCCGACTTCTTCGACGTCGAACGCTTCGAGAAGATCAGCGTGGTGGTCACCGGGCTGCAGCCGACCAAGGGCAA AATCGCCGACCTGCGCACCGACTTCACCGTCAAGGGCGTCACCGCACAACTGCCGCTGCCCGTCACGATCCTCGAGCTCG ACGACGGCTCGATCCGGATCACCGGCGAAACCACGCTCGATCGCGCCCGATTCGACCTGGGCTGGAACCGGTTCGGCATG ATCGGCCGCACCGCGACGGCCGCGGCCGACGTCATCTTCGTCCGAGATTCGCAATAG
Upstream 100 bases:
>100_bases CACGGCATGATCGAGCGCATCGACGAATACTTCGATCCCGCCGGGATCGCGCCGCTGATGTGATAGGCGCTAGATTCGCC ACGACAGTTGGGGGTGATCG
Downstream 100 bases:
>100_bases ATTCGCAATAGATTTGCGGGCACCCCGATAAACCCACTGCGGCACCAGTAGCATCTGCAGCGTGTCGGACTCCACGCCCC AATCCAGCGTCGCCCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: YceI Like Family Protein; YceI-Like Family Protein; Ycei Family Protein; YceI Like Family; Ycei-Like Family Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTTLETLLHDPEMAGVWNLVPDRSAITFRIKNMWGLLTVRGRFTDFTGDGQLTGKGAVFGRVDIRAASLDTGIGRRDQHL RSPDFFDVERFEKISVVVTGLQPTKGKIADLRTDFTVKGVTAQLPLPVTILELDDGSIRITGETTLDRARFDLGWNRFGM IGRTATAAADVIFVRDSQ
Sequences:
>Translated_178_residues MTTLETLLHDPEMAGVWNLVPDRSAITFRIKNMWGLLTVRGRFTDFTGDGQLTGKGAVFGRVDIRAASLDTGIGRRDQHL RSPDFFDVERFEKISVVVTGLQPTKGKIADLRTDFTVKGVTAQLPLPVTILELDDGSIRITGETTLDRARFDLGWNRFGM IGRTATAAADVIFVRDSQ >Mature_177_residues TTLETLLHDPEMAGVWNLVPDRSAITFRIKNMWGLLTVRGRFTDFTGDGQLTGKGAVFGRVDIRAASLDTGIGRRDQHLR SPDFFDVERFEKISVVVTGLQPTKGKIADLRTDFTVKGVTAQLPLPVTILELDDGSIRITGETTLDRARFDLGWNRFGMI GRTATAAADVIFVRDSQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19697; Mature: 19566
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLETLLHDPEMAGVWNLVPDRSAITFRIKNMWGLLTVRGRFTDFTGDGQLTGKGAVFG CCCHHHHHCCCCCCCEEEECCCCCEEEEEEECEEEEEEEECEEEEECCCCEEECCCEEEE RVDIRAASLDTGIGRRDQHLRSPDFFDVERFEKISVVVTGLQPTKGKIADLRTDFTVKGV EEEEEEEECCCCCCCCCHHCCCCCCCCHHHCEEEEEEEECCCCCCCCEEEEECCEEEECE TAQLPLPVTILELDDGSIRITGETTLDRARFDLGWNRFGMIGRTATAAADVIFVRDSQ EEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TTLETLLHDPEMAGVWNLVPDRSAITFRIKNMWGLLTVRGRFTDFTGDGQLTGKGAVFG CCHHHHHCCCCCCCEEEECCCCCEEEEEEECEEEEEEEECEEEEECCCCEEECCCEEEE RVDIRAASLDTGIGRRDQHLRSPDFFDVERFEKISVVVTGLQPTKGKIADLRTDFTVKGV EEEEEEEECCCCCCCCCHHCCCCCCCCHHHCEEEEEEEECCCCCCCCEEEEECCEEEECE TAQLPLPVTILELDDGSIRITGETTLDRARFDLGWNRFGMIGRTATAAADVIFVRDSQ EEECCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA