Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409296

Identifier: 41409296

GI number: 41409296

Start: 3549635

End: 3550021

Strand: Direct

Name: 41409296

Synonym: MAP3198

Alternate gene names: NA

Gene position: 3549635-3550021 (Clockwise)

Preceding gene: 41409295

Following gene: 41409297

Centisome position: 73.49

GC content: 69.77

Gene sequence:

>387_bases
ATGACCGCCAGCGGTGCGAAAACCGTCGTCGACACGGCCGACCGGCTGTTCGCCGCCATCGAGCGCGGTGACGTGACCGC
GGTCGCGGCGATGTGGAGCGACGACATCGCGGTGTGGCGGGTCGGCTCCCGCCGCGACGACGACAAGGCCCGCGCCGTGC
GGGTGATCGACTGGTTCATCGGCGCGACCGCCCGGCGCCGCTACCAGATCCTGGACCGGCAGCTGTTCGACGGCGGCTTC
GTCCAGCAGCACGTCTTGCACGCCACCGGGCATGGCGGGCAAGCGATCTCGCTGCGGGTGTGCATCGTGATCAGGGTGGG
CGCGCACGGCATGATCGAGCGCATCGACGAATACTTCGATCCCGCCGGGATCGCGCCGCTGATGTGA

Upstream 100 bases:

>100_bases
CGTCATCGCCTGCCTGCGCGCGCTGGTGCGACGCCGGTTGGCCGTCGCCCATCCCGGCTACGACAACGAATAGCAAACAG
ATCGGAGGGGAGCGGGTGCC

Downstream 100 bases:

>100_bases
TAGGCGCTAGATTCGCCACGACAGTTGGGGGTGATCGATGACGACCTTGGAGACACTGCTGCACGATCCGGAGATGGCCG
GCGTGTGGAACCTGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTASGAKTVVDTADRLFAAIERGDVTAVAAMWSDDIAVWRVGSRRDDDKARAVRVIDWFIGATARRRYQILDRQLFDGGF
VQQHVLHATGHGGQAISLRVCIVIRVGAHGMIERIDEYFDPAGIAPLM

Sequences:

>Translated_128_residues
MTASGAKTVVDTADRLFAAIERGDVTAVAAMWSDDIAVWRVGSRRDDDKARAVRVIDWFIGATARRRYQILDRQLFDGGF
VQQHVLHATGHGGQAISLRVCIVIRVGAHGMIERIDEYFDPAGIAPLM
>Mature_127_residues
TASGAKTVVDTADRLFAAIERGDVTAVAAMWSDDIAVWRVGSRRDDDKARAVRVIDWFIGATARRRYQILDRQLFDGGFV
QQHVLHATGHGGQAISLRVCIVIRVGAHGMIERIDEYFDPAGIAPLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14108; Mature: 13977

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASGAKTVVDTADRLFAAIERGDVTAVAAMWSDDIAVWRVGSRRDDDKARAVRVIDWFI
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHH
GATARRRYQILDRQLFDGGFVQQHVLHATGHGGQAISLRVCIVIRVGAHGMIERIDEYFD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC
PAGIAPLM
CCCCCCCC
>Mature Secondary Structure 
TASGAKTVVDTADRLFAAIERGDVTAVAAMWSDDIAVWRVGSRRDDDKARAVRVIDWFI
CCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHH
GATARRRYQILDRQLFDGGFVQQHVLHATGHGGQAISLRVCIVIRVGAHGMIERIDEYFD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCC
PAGIAPLM
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA