| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409264
Identifier: 41409264
GI number: 41409264
Start: 3518006
End: 3518731
Strand: Reverse
Name: 41409264
Synonym: MAP3166c
Alternate gene names: NA
Gene position: 3518731-3518006 (Counterclockwise)
Preceding gene: 41409265
Following gene: 41409260
Centisome position: 72.85
GC content: 64.6
Gene sequence:
>726_bases ATGACGGATCCCCTGTGGACCGCCTATGCCGAGAAGGTGGACAAGGTCGACGGCTGGTTCTTCGAGGCCGACGTCGAGCT CTTCAGTCATCTGCTCGCTCGCCAGACGGCCGAGGGGATCAGCGGCGACATGCTGGAAATCGGCACCTACCAAGGCAAGT CGGCCATCCTGATGGGCTACGGTCTCCGCGACGACGAAGAACTGGTGATCTGCGATTTGTTCGAAGCGGTGGTGGACCAC ACCCACGGGTCGCCGAGCTCACGCGACCAATACTCGGGGTTGGACCAACAGCAGTTCCTGGCCAACTGGGACCGCTTCCA CACTCGCCGGCCGATGATTGAGGTCTGCGAATCATCGCAGCTCGACCTGGCAGATCGCGCCGTGCGCCTGGCCCACATCG ACGGCTGTCACGCCTACCCGTGCGTCGCCCATGACATCGAGCTGGCTGTGAGACACACGGCCGACCGGGGCGTGGTCGTG CTGGACGATTACCGGGGCGTCGAAACCCCCGGCGTCGCCGCGGCCGTCTGGCAGGCTGTCGGCAACGGTGTCTTGTTCCC GTTCGCGGCGACGTACATGAAGCTCTACGCCTGCGCGTCGCCCGCCGACCAGCATTACTGGTTGGAACAGGTCCGTGGTC GCGGTGACATCTGCGCCTTCCCCGACTTCGAGTTCCCCTCCTATCGGAGCATCTCCGAGGCGCAGCTTCGCCCCCTCGAT CGCTGA
Upstream 100 bases:
>100_bases TCCTCACGCACCACTTCGCACCGCGGGTCGGCCGGCGAGTCGATATCGATATGCTCGGCCTGCCGATCGCCGCGGAGGAG TTCATGCGCAGGAGCGGGTC
Downstream 100 bases:
>100_bases GCGGTCAGCCGCAAGAACCTTGGCGCGCTGCGTCTTCCAAGACATCGGCCGCTGCCGACGCGCTTTCGGCGGGTGTTCTC ATCCGCGCGGCCACCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTDPLWTAYAEKVDKVDGWFFEADVELFSHLLARQTAEGISGDMLEIGTYQGKSAILMGYGLRDDEELVICDLFEAVVDH THGSPSSRDQYSGLDQQQFLANWDRFHTRRPMIEVCESSQLDLADRAVRLAHIDGCHAYPCVAHDIELAVRHTADRGVVV LDDYRGVETPGVAAAVWQAVGNGVLFPFAATYMKLYACASPADQHYWLEQVRGRGDICAFPDFEFPSYRSISEAQLRPLD R
Sequences:
>Translated_241_residues MTDPLWTAYAEKVDKVDGWFFEADVELFSHLLARQTAEGISGDMLEIGTYQGKSAILMGYGLRDDEELVICDLFEAVVDH THGSPSSRDQYSGLDQQQFLANWDRFHTRRPMIEVCESSQLDLADRAVRLAHIDGCHAYPCVAHDIELAVRHTADRGVVV LDDYRGVETPGVAAAVWQAVGNGVLFPFAATYMKLYACASPADQHYWLEQVRGRGDICAFPDFEFPSYRSISEAQLRPLD R >Mature_240_residues TDPLWTAYAEKVDKVDGWFFEADVELFSHLLARQTAEGISGDMLEIGTYQGKSAILMGYGLRDDEELVICDLFEAVVDHT HGSPSSRDQYSGLDQQQFLANWDRFHTRRPMIEVCESSQLDLADRAVRLAHIDGCHAYPCVAHDIELAVRHTADRGVVVL DDYRGVETPGVAAAVWQAVGNGVLFPFAATYMKLYACASPADQHYWLEQVRGRGDICAFPDFEFPSYRSISEAQLRPLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27052; Mature: 26920
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLWTAYAEKVDKVDGWFFEADVELFSHLLARQTAEGISGDMLEIGTYQGKSAILMGY CCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC GLRDDEELVICDLFEAVVDHTHGSPSSRDQYSGLDQQQFLANWDRFHTRRPMIEVCESSQ CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCC LDLADRAVRLAHIDGCHAYPCVAHDIELAVRHTADRGVVVLDDYRGVETPGVAAAVWQAV CCHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHH GNGVLFPFAATYMKLYACASPADQHYWLEQVRGRGDICAFPDFEFPSYRSISEAQLRPLD CCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHCCCCC R C >Mature Secondary Structure TDPLWTAYAEKVDKVDGWFFEADVELFSHLLARQTAEGISGDMLEIGTYQGKSAILMGY CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEC GLRDDEELVICDLFEAVVDHTHGSPSSRDQYSGLDQQQFLANWDRFHTRRPMIEVCESSQ CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCC LDLADRAVRLAHIDGCHAYPCVAHDIELAVRHTADRGVVVLDDYRGVETPGVAAAVWQAV CCHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHH GNGVLFPFAATYMKLYACASPADQHYWLEQVRGRGDICAFPDFEFPSYRSISEAQLRPLD CCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA