| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409263
Identifier: 41409263
GI number: 41409263
Start: 3516835
End: 3518001
Strand: Direct
Name: 41409263
Synonym: MAP3165
Alternate gene names: NA
Gene position: 3516835-3518001 (Clockwise)
Preceding gene: 41409262
Following gene: 41409274
Centisome position: 72.82
GC content: 68.04
Gene sequence:
>1167_bases ATGAGATTTGCGCTCGCGACCATGGGAACCCGCGGGGATGTCGAGCCGTTCGCCACGATCGGCCGGGAGCTGCAGCGCCG GGGTCACGAGATACGGATGGCGGTGCCGCCCAACTACATTCGCTTCGTCGAGTCGGCGGGGCTTTCCGCGGTTCCCCACG GCCCGGACCAGGTCAAGCAGAACGAGGACATCGTCCGCAAATACGGCACTGCGCCGAACCCGATGTTTCTGGCGTGGGTG ATTTCGGAGGATCTCAAGCGGCTCTGGCCCTCGTTGGGCACCGCGCTGATGTCGCTGGCCGACGGGGCCGACTTGCTGTT GACTGACACGAGCGAGCACGGCCTGGCCGCCAATGTCGCTGAGTACTACGACATTCCGGCGGCCACACTGCACTATTACC CCAGCGGTGGGGCCGCGCAGTTGACCCAGGAAGCCGAATCCGCCCAGCGCCGGGCGCTGGGCCTGTCGGGGCCGACCGCA CCGGCGGCGCGACGGCCGATGGAGCTGCAGGCATACGACGAATTCTTCTTTCCCGGGCTGGCGGCCGAATGGGCCCAATG CGGGGTCCGACGCCCTTTCGTCGGTGCGCTGACGCTGGAGTTGCCGACCGAGGCCGACGACGAGGTGCTGTCCTGGATCG CTGCGGGGACGCCGCCGATCTACTTCGGCTTCGGCAGCAGCGCGCGGGTCGCATCGCCAGGTGATGTGATCGCAATGATC ACCACCGCGTGCGCCGAGCTGGGCGAGCGGGCGCTGATTTGCAGCGGCGTCAGCGATCTCACCCAGATCCGGACCGGCGA CCACGTCAAGGCGGTGAGCGCGGTGAACCACTCCACCGTGTTTCCCGCGTGCCGCGCGGTCGTCCACCACGGCGGTCCCG GCACCACGTTCGCGGGGATCCGGGCGGGAGTGCCCAGCCTGGTGCTCGCCGTCTCGGTCGACCAACCGCTGTGGGCCGCG GTGATCAATCAGCTGGAAGTCGGCATCGGACGGCATTTCTCGGAGACGACCCCGGATTCGCTGGTGGCGGATCTGCGGTC GGTCCTCGATCCCCGTTACGTCACCCGTACCCGTGCGGTGGCCGCGCGGATGAGAACACCCGCCGAAAGCGCGTCGGCAG CGGCCGATGTCTTGGAAGACGCAGCGCGCCAAGGTTCTTGCGGCTGA
Upstream 100 bases:
>100_bases AAACTCGAGAAGACCATCGGCGCCGATCTGGCCAAGGGCATTCCCGAGATGCTGCGCTTCACCACCACCTGGATCGACGA GAACGCATGACGCCCCGGCA
Downstream 100 bases:
>100_bases CCGCTCAGCGATCGAGGGGGCGAAGCTGCGCCTCGGAGATGCTCCGATAGGAGGGGAACTCGAAGTCGGGGAAGGCGCAG ATGTCACCGCGACCACGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRFALATMGTRGDVEPFATIGRELQRRGHEIRMAVPPNYIRFVESAGLSAVPHGPDQVKQNEDIVRKYGTAPNPMFLAWV ISEDLKRLWPSLGTALMSLADGADLLLTDTSEHGLAANVAEYYDIPAATLHYYPSGGAAQLTQEAESAQRRALGLSGPTA PAARRPMELQAYDEFFFPGLAAEWAQCGVRRPFVGALTLELPTEADDEVLSWIAAGTPPIYFGFGSSARVASPGDVIAMI TTACAELGERALICSGVSDLTQIRTGDHVKAVSAVNHSTVFPACRAVVHHGGPGTTFAGIRAGVPSLVLAVSVDQPLWAA VINQLEVGIGRHFSETTPDSLVADLRSVLDPRYVTRTRAVAARMRTPAESASAAADVLEDAARQGSCG
Sequences:
>Translated_388_residues MRFALATMGTRGDVEPFATIGRELQRRGHEIRMAVPPNYIRFVESAGLSAVPHGPDQVKQNEDIVRKYGTAPNPMFLAWV ISEDLKRLWPSLGTALMSLADGADLLLTDTSEHGLAANVAEYYDIPAATLHYYPSGGAAQLTQEAESAQRRALGLSGPTA PAARRPMELQAYDEFFFPGLAAEWAQCGVRRPFVGALTLELPTEADDEVLSWIAAGTPPIYFGFGSSARVASPGDVIAMI TTACAELGERALICSGVSDLTQIRTGDHVKAVSAVNHSTVFPACRAVVHHGGPGTTFAGIRAGVPSLVLAVSVDQPLWAA VINQLEVGIGRHFSETTPDSLVADLRSVLDPRYVTRTRAVAARMRTPAESASAAADVLEDAARQGSCG >Mature_388_residues MRFALATMGTRGDVEPFATIGRELQRRGHEIRMAVPPNYIRFVESAGLSAVPHGPDQVKQNEDIVRKYGTAPNPMFLAWV ISEDLKRLWPSLGTALMSLADGADLLLTDTSEHGLAANVAEYYDIPAATLHYYPSGGAAQLTQEAESAQRRALGLSGPTA PAARRPMELQAYDEFFFPGLAAEWAQCGVRRPFVGALTLELPTEADDEVLSWIAAGTPPIYFGFGSSARVASPGDVIAMI TTACAELGERALICSGVSDLTQIRTGDHVKAVSAVNHSTVFPACRAVVHHGGPGTTFAGIRAGVPSLVLAVSVDQPLWAA VINQLEVGIGRHFSETTPDSLVADLRSVLDPRYVTRTRAVAARMRTPAESASAAADVLEDAARQGSCG
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 - InterPro: IPR002213 [H]
Pfam domain/function: PF03033 Glyco_transf_28; PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 41234; Mature: 41234
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFALATMGTRGDVEPFATIGRELQRRGHEIRMAVPPNYIRFVESAGLSAVPHGPDQVKQ CCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHC NEDIVRKYGTAPNPMFLAWVISEDLKRLWPSLGTALMSLADGADLLLTDTSEHGLAANVA CHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH EYYDIPAATLHYYPSGGAAQLTQEAESAQRRALGLSGPTAPAARRPMELQAYDEFFFPGL HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCH AAEWAQCGVRRPFVGALTLELPTEADDEVLSWIAAGTPPIYFGFGSSARVASPGDVIAMI HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH TTACAELGERALICSGVSDLTQIRTGDHVKAVSAVNHSTVFPACRAVVHHGGPGTTFAGI HHHHHHHCCCEEEECCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHH RAGVPSLVLAVSVDQPLWAAVINQLEVGIGRHFSETTPDSLVADLRSVLDPRYVTRTRAV HHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH AARMRTPAESASAAADVLEDAARQGSCG HHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRFALATMGTRGDVEPFATIGRELQRRGHEIRMAVPPNYIRFVESAGLSAVPHGPDQVKQ CCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHC NEDIVRKYGTAPNPMFLAWVISEDLKRLWPSLGTALMSLADGADLLLTDTSEHGLAANVA CHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH EYYDIPAATLHYYPSGGAAQLTQEAESAQRRALGLSGPTAPAARRPMELQAYDEFFFPGL HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCH AAEWAQCGVRRPFVGALTLELPTEADDEVLSWIAAGTPPIYFGFGSSARVASPGDVIAMI HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH TTACAELGERALICSGVSDLTQIRTGDHVKAVSAVNHSTVFPACRAVVHHGGPGTTFAGI HHHHHHHCCCEEEECCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHH RAGVPSLVLAVSVDQPLWAAVINQLEVGIGRHFSETTPDSLVADLRSVLDPRYVTRTRAV HHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH AARMRTPAESASAAADVLEDAARQGSCG HHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]