| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409261
Identifier: 41409261
GI number: 41409261
Start: 3515610
End: 3516308
Strand: Direct
Name: 41409261
Synonym: MAP3163
Alternate gene names: NA
Gene position: 3515610-3516308 (Clockwise)
Preceding gene: 41409258
Following gene: 41409262
Centisome position: 72.79
GC content: 71.82
Gene sequence:
>699_bases GTGGGCGCGGCAGCACAGGGCGGAAACAAGCGCGCGGGCGCACCGTCGCTGCTGCCCGGCGGGCGCTGGGCGGCGGTGCT GGCGGGCGCGGTCATGCTGGCGCAGTGCACCGCGTCGTCGGCCGCCGCCGACCCGACGGTCCGGCCGGTGACCGCCGCCG AACTGGGCGCGAGCTGGCACCCGGGCTGCCCGGTGGAACCCGGGCAACTGCGACGGGTCGACGTCGACCACATCGGTTTC GACGGCCAAACCCACCGGGGCGAGCTGATCGTGCACCAAGACCTGGCGCCGCAGGTGGTCACGATCTTCGCTCGGCTGTA CCGGCTGGGCTTTCCCATCGAGAAGATCCGCACGGTCGATCACTACCGCGACGCCGACGACGAGCTGTCCATGGAGGACG ACAACACCTCGGCGTTCAACTGCCGGGGCATTCCGGGCAGCGACCGCTGGTCGGAGCATGCCTACGGCCGGGCGATCGAC CTCAACCCGCGTCTCAACCCGTGCCTGTACCCCACCGGCGCCTTCCAACCGCAGAACGCCCGGGGACTTTCTGGACCGCG ACCGCACCGACCCGGGCCTGCTGCACGACGGCGACCCGGCCGTGCGCGCCTTCACCGACAGCGGGTGGCGCTGGGGTGGA CAGTGGACGGCGCCCGTCGACTACCAGCATTTCGAGCGGCCCTGAAGCAGCCTCGGTAG
Upstream 100 bases:
>100_bases GCCGGTCGAGGAAGCCGCCACCAGGGTGAGCAAGATGGTTGCCAGGACGAGGACATTTCGCACCGATGGGTGACCGGGCA TGAGGCAAGCGTAGGTCGCG
Downstream 100 bases:
>100_bases CCTGGGTTCGATATGTCGCGCTCCATTGACGTCTCGACCGAGTCGCCCGCCAGCGTCGAGCAGATCCACGCGGCGTTCGG TCGCGAGGACTATTGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ig Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MGAAAQGGNKRAGAPSLLPGGRWAAVLAGAVMLAQCTASSAAADPTVRPVTAAELGASWHPGCPVEPGQLRRVDVDHIGF DGQTHRGELIVHQDLAPQVVTIFARLYRLGFPIEKIRTVDHYRDADDELSMEDDNTSAFNCRGIPGSDRWSEHAYGRAID LNPRLNPCLYPTGAFQPQNARGLSGPRPHRPGPAARRRPGRARLHRQRVALGWTVDGARRLPAFRAALKQPR
Sequences:
>Translated_232_residues MGAAAQGGNKRAGAPSLLPGGRWAAVLAGAVMLAQCTASSAAADPTVRPVTAAELGASWHPGCPVEPGQLRRVDVDHIGF DGQTHRGELIVHQDLAPQVVTIFARLYRLGFPIEKIRTVDHYRDADDELSMEDDNTSAFNCRGIPGSDRWSEHAYGRAID LNPRLNPCLYPTGAFQPQNARGLSGPRPHRPGPAARRRPGRARLHRQRVALGWTVDGARRLPAFRAALKQPR >Mature_231_residues GAAAQGGNKRAGAPSLLPGGRWAAVLAGAVMLAQCTASSAAADPTVRPVTAAELGASWHPGCPVEPGQLRRVDVDHIGFD GQTHRGELIVHQDLAPQVVTIFARLYRLGFPIEKIRTVDHYRDADDELSMEDDNTSAFNCRGIPGSDRWSEHAYGRAIDL NPRLNPCLYPTGAFQPQNARGLSGPRPHRPGPAARRRPGRARLHRQRVALGWTVDGARRLPAFRAALKQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25120; Mature: 24989
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAAAQGGNKRAGAPSLLPGGRWAAVLAGAVMLAQCTASSAAADPTVRPVTAAELGASWH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC PGCPVEPGQLRRVDVDHIGFDGQTHRGELIVHQDLAPQVVTIFARLYRLGFPIEKIRTVD CCCCCCCCCEEEEEHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH HYRDADDELSMEDDNTSAFNCRGIPGSDRWSEHAYGRAIDLNPRLNPCLYPTGAFQPQNA HHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCEEECCCCCCCEECCCCCCCCCCC RGLSGPRPHRPGPAARRRPGRARLHRQRVALGWTVDGARRLPAFRAALKQPR CCCCCCCCCCCCCHHHCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure GAAAQGGNKRAGAPSLLPGGRWAAVLAGAVMLAQCTASSAAADPTVRPVTAAELGASWH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC PGCPVEPGQLRRVDVDHIGFDGQTHRGELIVHQDLAPQVVTIFARLYRLGFPIEKIRTVD CCCCCCCCCEEEEEHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH HYRDADDELSMEDDNTSAFNCRGIPGSDRWSEHAYGRAIDLNPRLNPCLYPTGAFQPQNA HHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCEEECCCCCCCEECCCCCCCCCCC RGLSGPRPHRPGPAARRRPGRARLHRQRVALGWTVDGARRLPAFRAALKQPR CCCCCCCCCCCCCHHHCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA