| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409253
Identifier: 41409253
GI number: 41409253
Start: 3509293
End: 3509565
Strand: Reverse
Name: 41409253
Synonym: MAP3155c
Alternate gene names: NA
Gene position: 3509565-3509293 (Counterclockwise)
Preceding gene: 41409254
Following gene: 41409250
Centisome position: 72.67
GC content: 68.86
Gene sequence:
>273_bases ATGGCGCGGATCGACAATGCGATGGACCCCGTGCGGCGCGTGCTGCGACACCAGATCAGCGTCGGCGCGCTCATCGAGTT GGCGGTGTGGCTGGCGATCCCCTACCTGTGTATCGGCTTCGCGTGGACCGTTTTTCACGCCGATCAGACCCACCGAATCC AGGCGCGGATCGAGGCGGTGTGGCCGGCCGGCGCCGATGTCGCGGCCTTCGGGGTGGCCACGGCGTTGTGGCCGGCGTCG CTGCAAATCGCCGACGCGTGCCGTACGCCGTAG
Upstream 100 bases:
>100_bases AGCTTGCCCAGCAGTGGCTGGCCGGTCATTTGGGCGGTGATCTCGACGCCGTCGTCGATTACGCTTCGAAGCTGGTGCTG CGGTAGCGGGGAGTGCGGTC
Downstream 100 bases:
>100_bases CCGACTTTCGCTCCGAACACGTGCGCGACGGCACCGTTTGCTCCTAGGCTGACACACCATGTCCATCGACCGATTCGGCC TCCTTGCGGGCACCATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MARIDNAMDPVRRVLRHQISVGALIELAVWLAIPYLCIGFAWTVFHADQTHRIQARIEAVWPAGADVAAFGVATALWPAS LQIADACRTP
Sequences:
>Translated_90_residues MARIDNAMDPVRRVLRHQISVGALIELAVWLAIPYLCIGFAWTVFHADQTHRIQARIEAVWPAGADVAAFGVATALWPAS LQIADACRTP >Mature_89_residues ARIDNAMDPVRRVLRHQISVGALIELAVWLAIPYLCIGFAWTVFHADQTHRIQARIEAVWPAGADVAAFGVATALWPASL QIADACRTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9864; Mature: 9732
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIDNAMDPVRRVLRHQISVGALIELAVWLAIPYLCIGFAWTVFHADQTHRIQARIEAV CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC WPAGADVAAFGVATALWPASLQIADACRTP CCCCCCHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure ARIDNAMDPVRRVLRHQISVGALIELAVWLAIPYLCIGFAWTVFHADQTHRIQARIEAV CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC WPAGADVAAFGVATALWPASLQIADACRTP CCCCCCHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA