Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409251

Identifier: 41409251

GI number: 41409251

Start: 3506744

End: 3507307

Strand: Direct

Name: 41409251

Synonym: MAP3153

Alternate gene names: NA

Gene position: 3506744-3507307 (Clockwise)

Preceding gene: 41409249

Following gene: 41409252

Centisome position: 72.61

GC content: 65.6

Gene sequence:

>564_bases
ATGGCCGACATGATTGTCAAATCGCCCGACGAAGTCGTCGCGTTCCTGAAAGCACAGCACAACCTCATCGAGGACATGTT
CGACCAGGTGCTGCACGCGACCGACCCCAAAGCGCGCGAAGAGCCCTTCGCGACGCTGCGCCAATTGCTGGCGGTGCATG
AAACCGCCGAGGAAATGCTCGTGCATCCGCCGGCACGCAAGGAGGCCGATGCCGGCGACGCGGTCGTCGACGCCCGCTTG
CACGAAGAGCACAGCGCCAAGGAACTGCTGTCGGCGATCGAAAAGCTGGACAGCACCACGGACCAGTTCCTCGACGAGGT
GACGAAGTTGCGAGAAGCCGTGCTCGAACACGCCACCCGGGAGGAAAACGAGGAATTCCCGGCCCTGCAGCGCCTCGACA
GCGACGACCTCAAGCGGATGGGCACCGCGGTGCGCGCCGCCGAGGCCATCGCCCCGACCCACCCGGATCCCGGTGTGGAA
TCGGCGACGCTGAATTTCGCGGTCGGCCCGTTCGCCTCGATGCTCGATCGCGCCCGCGACCTGATCGGCCGGGCCATCGG
TTAG

Upstream 100 bases:

>100_bases
CGCGCCACCGTTTAGCGACTCGGCCGGCGGGTATGCCTGGGCCAGCCGCACGCAGCCCGGACGTGCGCATCCCACTCTGC
CGACACAGGAGGTATCGGCG

Downstream 100 bases:

>100_bases
CCCGGGGCCGGCCCGAGTTTCCGTACCCTCGGTGAGATGAGCGTCGCACCGGAGACCACCGTCGCCCTGCAGGACCGGTT
TTTCCGCGAATTACCGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MADMIVKSPDEVVAFLKAQHNLIEDMFDQVLHATDPKAREEPFATLRQLLAVHETAEEMLVHPPARKEADAGDAVVDARL
HEEHSAKELLSAIEKLDSTTDQFLDEVTKLREAVLEHATREENEEFPALQRLDSDDLKRMGTAVRAAEAIAPTHPDPGVE
SATLNFAVGPFASMLDRARDLIGRAIG

Sequences:

>Translated_187_residues
MADMIVKSPDEVVAFLKAQHNLIEDMFDQVLHATDPKAREEPFATLRQLLAVHETAEEMLVHPPARKEADAGDAVVDARL
HEEHSAKELLSAIEKLDSTTDQFLDEVTKLREAVLEHATREENEEFPALQRLDSDDLKRMGTAVRAAEAIAPTHPDPGVE
SATLNFAVGPFASMLDRARDLIGRAIG
>Mature_186_residues
ADMIVKSPDEVVAFLKAQHNLIEDMFDQVLHATDPKAREEPFATLRQLLAVHETAEEMLVHPPARKEADAGDAVVDARLH
EEHSAKELLSAIEKLDSTTDQFLDEVTKLREAVLEHATREENEEFPALQRLDSDDLKRMGTAVRAAEAIAPTHPDPGVES
ATLNFAVGPFASMLDRARDLIGRAIG

Specific function: Unknown

COG id: COG5592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20638; Mature: 20507

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMIVKSPDEVVAFLKAQHNLIEDMFDQVLHATDPKAREEPFATLRQLLAVHETAEEML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHPPARKEADAGDAVVDARLHEEHSAKELLSAIEKLDSTTDQFLDEVTKLREAVLEHATR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EENEEFPALQRLDSDDLKRMGTAVRAAEAIAPTHPDPGVESATLNFAVGPFASMLDRARD
HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIGRAIG
HHHHHCC
>Mature Secondary Structure 
ADMIVKSPDEVVAFLKAQHNLIEDMFDQVLHATDPKAREEPFATLRQLLAVHETAEEML
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHPPARKEADAGDAVVDARLHEEHSAKELLSAIEKLDSTTDQFLDEVTKLREAVLEHATR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EENEEFPALQRLDSDDLKRMGTAVRAAEAIAPTHPDPGVESATLNFAVGPFASMLDRARD
HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIGRAIG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA