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The map label for this gene is 41409249

Identifier: 41409249

GI number: 41409249

Start: 3504250

End: 3505536

Strand: Direct

Name: 41409249

Synonym: MAP3151

Alternate gene names: NA

Gene position: 3504250-3505536 (Clockwise)

Preceding gene: 41409246

Following gene: 41409251

Centisome position: 72.56

GC content: 74.36

Gene sequence:

>1287_bases
ATGATCGAACATGTGTTCGAATCACTGATGGCGGTCGACCCGGCGGCCGGCGAATCGGCGCTGATAGAGCGCATCTCGGA
GTTGGAGATGCTCAAGTGCGCCGCCGCCGCGGCCCAGGCCCGGGCGGCGGCCGCCCTGGACGCGGCGCGCCGAGCGGCCG
AAGCGGCCGCCGGGGTGCCCGCCGCGCGCCGCGGACGCGGGGTGGCCAGCGAGGTCGCGCTGGCGCGGCGGGATTCGCCG
GCGCGCGGCGGTCGGCATCTGGGCTTCGCCAAGGCCCTGGTGCACGAAATGCCGCACACGCTGGCGGCGCTGGAGTGCGG
GGCGCTCTCCGAATGGCGGGCCACACTGATCGTGCGCGAGAGCGCCTGCCTGGACGCCGAGGACCGTCGCGCCCTGGATG
CGGAGCTGTGCGCCGACCCGGCGGGCCTGAGCGGCATGGGCGACGCGCGGGTGGCCGCGGCCGCCAAGGCGATCGCCTAC
CGGCTCGATCCGCATGCCGTCGTGGAGCGGGCGGCCAAGGCGGAGAACGACCGCACGGTCACCATCCGGCCCGCGCCCGA
CACGATGACGTACCTGACCGCGTTATTGCCCGTGGCCCAAGGTGTTTCGGTGTATGCCGCGCTGCGCCGCGAGGCCGACA
CCCGCGGCGACGGGCGCCCGCGCGGACAGGTCATGGCCGACACCCTGGTGGAAAGGGTCACCGGCCGCCGCGCGACGGTG
CCCACCCCGGTCGCGGTCAACCTGGTGCTGTCCGACGAAACGCTGCTCGGCGGTGCGGATGCGCCGGGCGAGATCAGTGG
CTACGGCCCGATTCCCGCGGCGGTCGCCCGCCGCATGGTCGCCAACGCGGCCGCCGACCCGAGGTCGCGGGCCACCCTGC
GCCGGCTCTACGCGCACCCGCGGGCCGGGGCGCTGGTGGCCATGGAGTCGCGGGCGCGCCTGTTCCCGCAGGGGCTGGCG
CGGTTCATCGGGCTACGCGATCAGCGCTGCCGCACCCCGTACTGCGACGCGCCGATCCGGCACCGCGACCACGCACAGCC
GTGGGCCGACGGCGGCGCGACCAGCGCGGGCAACGGCCTGGGGCTGTGCGAGCACTGCAACTACGTCAAGGAAACGCCCG
GCTGGACGGTGAGCGCCGGCGTTGACGAAACCCACACCCACACAGCGCTTTTCACGACGCCCACCGGCCAGACCTACCGG
TCGACGGCCCCGCCGCGGGCTCCCGCGATCACGATGAGCACGGTCGAAGTCCGCGTCACCGTCGCGTTCGCACGACATGC
CGCCTGA

Upstream 100 bases:

>100_bases
TCGTCGGGACCGACCTTGTCATAGACCCGCGCCACCTGGATCCGCCTGCCGGCGCTCACCCATCCAGGCTAGCGACGGGC
GGGCGTCAGCGGAACCTGCT

Downstream 100 bases:

>100_bases
CGCCTCAGTAGTGGTAGGTGTCCGACGGCGCGGGTGAGTGGTCGCGTTCTTCCTCGTCGATGTCCAGCGCCTCGATGCCG
TACGCGCGAGCCAGCTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Nuclease; HNH Endonuclease Domain-Containing Protein

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MIEHVFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVPAARRGRGVASEVALARRDSP
ARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAY
RLDPHAVVERAAKAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATV
PTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVAMESRARLFPQGLA
RFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYR
STAPPRAPAITMSTVEVRVTVAFARHAA

Sequences:

>Translated_428_residues
MIEHVFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVPAARRGRGVASEVALARRDSP
ARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAY
RLDPHAVVERAAKAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATV
PTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVAMESRARLFPQGLA
RFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYR
STAPPRAPAITMSTVEVRVTVAFARHAA
>Mature_428_residues
MIEHVFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVPAARRGRGVASEVALARRDSP
ARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRESACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAY
RLDPHAVVERAAKAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATV
PTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHPRAGALVAMESRARLFPQGLA
RFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGLGLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYR
STAPPRAPAITMSTVEVRVTVAFARHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45125; Mature: 45125

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHVFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVP
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AARRGRGVASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRE
HHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEC
SACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTV
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
TIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATV
EEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHP
CCCEEEEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
RAGALVAMESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGL
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPAITMSTVEVRVT
CHHHHCCHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEE
VAFARHAA
EEEHHHCC
>Mature Secondary Structure
MIEHVFESLMAVDPAAGESALIERISELEMLKCAAAAAQARAAAALDAARRAAEAAAGVP
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AARRGRGVASEVALARRDSPARGGRHLGFAKALVHEMPHTLAALECGALSEWRATLIVRE
HHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEC
SACLDAEDRRALDAELCADPAGLSGMGDARVAAAAKAIAYRLDPHAVVERAAKAENDRTV
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
TIRPAPDTMTYLTALLPVAQGVSVYAALRREADTRGDGRPRGQVMADTLVERVTGRRATV
EEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PTPVAVNLVLSDETLLGGADAPGEISGYGPIPAAVARRMVANAAADPRSRATLRRLYAHP
CCCEEEEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
RAGALVAMESRARLFPQGLARFIGLRDQRCRTPYCDAPIRHRDHAQPWADGGATSAGNGL
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLCEHCNYVKETPGWTVSAGVDETHTHTALFTTPTGQTYRSTAPPRAPAITMSTVEVRVT
CHHHHCCHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEE
VAFARHAA
EEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA