| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ccrB
Identifier: 41409246
GI number: 41409246
Start: 3502825
End: 3503193
Strand: Direct
Name: ccrB
Synonym: MAP3148
Alternate gene names: 41409246
Gene position: 3502825-3503193 (Clockwise)
Preceding gene: 41409245
Following gene: 41409249
Centisome position: 72.53
GC content: 71.27
Gene sequence:
>369_bases ATGACGACGGTCGCGGTCTGGGTCGGCGTCGCGCTCATCGGCGGCGTCGGATCGGTGCTGCGATTCGTCGTCGACGGTGC GGTGGCGCGCCGGGCGTCGCGGCCGTTTCCGCTCGGCACCCTCGTCGTGAACCTCAGCGGCGCAGCGCTTCTCGGCTTCC TGGGCGGCCTGGCGCTGAGCAGGGAGGCGGCGCTGTTGGCCGGCACCGCGTTCGTCGGCGCCTACACCACCTTTTCGACC TGGATGCTGGAGACACAGCGCCTGGGCGAGGAGCGTCAGCTGCGCGCGGCGCTGGCCAACATCGTGGTCAGCGTCGTGCT CGGTGGGGCGGCGGCGTTCATCGGACAGCAGCTGGCCCAGTTGGTGTGA
Upstream 100 bases:
>100_bases ACTGGGGCCTGGCGGCCGGCTACACCCTGACCAGCATCGCGGCCGGGTTGTTGGCCGTGCACCTGGCCACCAAACTGGTG CGCCGGGTCCGGGTGCGCCG
Downstream 100 bases:
>100_bases GCGCGCGCCGTCAGGCGTCGCGGCGCCGGGGCACGTCGTCGGGGGTCCGTGGCAGCACGTAGAGCGCCATGCGCCGGTTC GCCATGTCATGCTCGCCGAG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTTVAVWVGVALIGGVGSVLRFVVDGAVARRASRPFPLGTLVVNLSGAALLGFLGGLALSREAALLAGTAFVGAYTTFST WMLETQRLGEERQLRAALANIVVSVVLGGAAAFIGQQLAQLV
Sequences:
>Translated_122_residues MTTVAVWVGVALIGGVGSVLRFVVDGAVARRASRPFPLGTLVVNLSGAALLGFLGGLALSREAALLAGTAFVGAYTTFST WMLETQRLGEERQLRAALANIVVSVVLGGAAAFIGQQLAQLV >Mature_121_residues TTVAVWVGVALIGGVGSVLRFVVDGAVARRASRPFPLGTLVVNLSGAALLGFLGGLALSREAALLAGTAFVGAYTTFSTW MLETQRLGEERQLRAALANIVVSVVLGGAAAFIGQQLAQLV
Specific function: Unknown
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB2_MYCPA (P61393)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962082.1 - EnsemblBacteria: EBMYCT00000037064 - GeneID: 2719980 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3148 - NMPDR: fig|262316.1.peg.3148 - GeneTree: EBGT00050000016407 - HOGENOM: HBG753179 - OMA: CYTTVSS - ProtClustDB: PRK14228 - HAMAP: MF_00454 - InterPro: IPR003691
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 12484; Mature: 12353
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x122f0624)-; HASH(0x11f94fe8)-; HASH(0x10b19510)-; HASH(0x11e0e4fc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAVWVGVALIGGVGSVLRFVVDGAVARRASRPFPLGTLVVNLSGAALLGFLGGLALS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHH REAALLAGTAFVGAYTTFSTWMLETQRLGEERQLRAALANIVVSVVLGGAAAFIGQQLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LV HH >Mature Secondary Structure TTVAVWVGVALIGGVGSVLRFVVDGAVARRASRPFPLGTLVVNLSGAALLGFLGGLALS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHH REAALLAGTAFVGAYTTFSTWMLETQRLGEERQLRAALANIVVSVVLGGAAAFIGQQLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LV HH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA