| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ccrB
Identifier: 41409245
GI number: 41409245
Start: 3502430
End: 3502828
Strand: Direct
Name: ccrB
Synonym: MAP3147
Alternate gene names: 41409245
Gene position: 3502430-3502828 (Clockwise)
Preceding gene: 41409241
Following gene: 41409246
Centisome position: 72.52
GC content: 70.68
Gene sequence:
>399_bases GTGGCGCAACACGACTACCGCGAGTTGGCCGCGGTGTTCGCCGGCGGGGCGCTGGGTTCGCTGGCCCGCGCCGCGCTGAG CGCGCTGGCGGCGGGCGACCCGGCGAGCTGGCCGTGGCCGACGTTCACGGTCAACATCGTCGGCGCCTTCCTGGTGGGTT ACTTCACCACCCGGCTGCTGGAGCGATTGCCGACGTCGAGCTACCGGCGCCCGCTGCTGGGCACCGGATTCTGTGGCGGA CTCACCACGTTCTCCACGATGCAGGTCGAGACGCTGACCATGCTTGAACACCACCACTGGGGCCTGGCGGCCGGCTACAC CCTGACCAGCATCGCGGCCGGGTTGTTGGCCGTGCACCTGGCCACCAAACTGGTGCGCCGGGTCCGGGTGCGCCGATGA
Upstream 100 bases:
>100_bases ATTTCCAATTCTGCCCGTCTCCGTGTCGCCCCGGCGGCGCCGGTGTTGCAAGCCCCCATACGCTGCATAGCGCAGCGGCG AACGAAGGGAATTCACGCCA
Downstream 100 bases:
>100_bases CGACGGTCGCGGTCTGGGTCGGCGTCGCGCTCATCGGCGGCGTCGGATCGGTGCTGCGATTCGTCGTCGACGGTGCGGTG GCGCGCCGGGCGTCGCGGCC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MAQHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLERLPTSSYRRPLLGTGFCGG LTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHLATKLVRRVRVRR
Sequences:
>Translated_132_residues MAQHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLERLPTSSYRRPLLGTGFCGG LTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHLATKLVRRVRVRR >Mature_131_residues AQHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLLERLPTSSYRRPLLGTGFCGGL TTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHLATKLVRRVRVRR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB1_MYCPA (P61392)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962081.1 - EnsemblBacteria: EBMYCT00000037599 - GeneID: 2719297 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3147 - NMPDR: fig|262316.1.peg.3147 - GeneTree: EBGT00050000016406 - HOGENOM: HBG753179 - OMA: SAWALRA - ProtClustDB: PRK14216 - HAMAP: MF_00454 - InterPro: IPR003691
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 14243; Mature: 14112
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11dc54ac)-; HASH(0x11e331d8)-; HASH(0x123cfc34)-; HASH(0x120b5d4c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERLPTSSYRRPLLGTGFCGGLTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHL HHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ATKLVRRVRVRR HHHHHHHHHCCH >Mature Secondary Structure AQHDYRELAAVFAGGALGSLARAALSALAAGDPASWPWPTFTVNIVGAFLVGYFTTRLL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERLPTSSYRRPLLGTGFCGGLTTFSTMQVETLTMLEHHHWGLAAGYTLTSIAAGLLAVHL HHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ATKLVRRVRVRR HHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA