| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409226
Identifier: 41409226
GI number: 41409226
Start: 3478536
End: 3479957
Strand: Direct
Name: 41409226
Synonym: MAP3128
Alternate gene names: NA
Gene position: 3478536-3479957 (Clockwise)
Preceding gene: 41409225
Following gene: 41409227
Centisome position: 72.02
GC content: 68.85
Gene sequence:
>1422_bases GTGGCAGGGAGGGAAGTGACATCACGATTCGCCGGCCTGGCGCTGGCGCCGGTGGCCATCGCGCTGGCCATGCTGTTCGC CCCGTTCGCCGGGGCCGACGGCTACACCGATCAGCTGGTGGCGAGGTTCGACAGCCAGACGCATGTGGTGGCCGACCCGG GGGCACGGCCACCGCTGCAGAACCCGGACGGGCTGAACCGGCAGATCCTGGCGGGCCCGTGGCGGTGGAGTTCCGGCCCG CCGATCTGGGTGGCGGCGGTGGCGCCCGCCCAGAGCGGGGTGACCACGGCCGATTCCATCCACGAGGCCATGCTGCGACG AGACGCCCAGTTCAGCGGGGTCATCCTGGTCATCGACTCCCGCGGCTACCACGTGCGGGCCTACCACGTGCCCAAGGTCG TCGCGGACAACGTCGACGAATTCATGAACCAGTCGGCGCAAGATCATCGCAACGATCCGTACGGCGCGGCCAGTGAATTC GTCGGCAAGCTGTCGGGCGTCAGCGTGCCCACCCGCGCACCGGTGTCCACCTCCCCGCTGGTGCAACAGCAGCGCGACGA CTGGGCCTGGCTGAAGGCGGCGTTCGTCATTGCCGGGATCGCGTTGGCGACGGCCGGCCTGATCTGGTTCGCGGTCAGTC GAAATCGCAAGCACCGCAAGGACATCGAGAACCGCGAGCAGATCAAGCAGGAGCTGATCACCGCCGCGTCGAACGTCGGC GACCTCGACAACGAAGTGCTCACCGACGGCAACACCGATGTGAGCGCCGAGTCGCTGAAGGCCAATGCCAGCCTGCACGA CGCCCGAAAAGCCTACGAGAAGGGCGATTACGGCGCGGCCCGCACCCACCTGCGGGTGGTGGAGTCCACGGTGGCCAAGG CCAACCGCAAACTGCACCCGGGGCAGCGCGAACCCGAAGGGGCCGGGGCGGATTCGTCGGTGCCCGCGCCGGAGCGCAAG CAGGCCAGCGTGCGCACCACCGACCCCGAGACCGGTCAGACGGTGACGATCAGCAACGCCGACTACCGCCCCACCGCGCA GCCCGGCTACCCGCACTACTTCGGCGGCGGCTACCACAACGGGATCTTCTTCCAGCCCGGCTTTTACCCGTACCCGTTCT GGGGCCCGGGCTGGGGTTGGGCGTTGGGCGACGTGCTGCTGATGGACGCGCTGCTGGACGACCATTGGGGCGGCGGATTC GAGCGCGGTTTCGAGGCCGGCCGCGACGCGGCCTTCGCGGACGCCGGCAGTCACAATGCTGCCAACTACGACGCCGCCAA CTACGAAGCCGCCAACTATGACGGCGCAAACTACGACGGCGGCTATGACGCGGGCGGCGACATCGGCTTCGACGGCGGCT GGGACTCGGGAGCCGGGTGGGATTCGGGTGGCTCCGACTCCGGCGGCGATATCGGCTTTTGA
Upstream 100 bases:
>100_bases AACCTGACCGGGGCGCACTGACCGGGTCCGGCGCCGGGCCGAAGGTGCCGTCTCGAGTGGACGATTCGCCGGTGCGCCGC AAGGATCGACAGCACAACTC
Downstream 100 bases:
>100_bases GCTCTCCCGGCCCAGGCGTTAGGTTCCTTCGATGAGCACGGACAAGATCAACCGCGGCATCCTGCTCGCCATGGTGGCGA TCGGGGCGGGCGCCTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MAGREVTSRFAGLALAPVAIALAMLFAPFAGADGYTDQLVARFDSQTHVVADPGARPPLQNPDGLNRQILAGPWRWSSGP PIWVAAVAPAQSGVTTADSIHEAMLRRDAQFSGVILVIDSRGYHVRAYHVPKVVADNVDEFMNQSAQDHRNDPYGAASEF VGKLSGVSVPTRAPVSTSPLVQQQRDDWAWLKAAFVIAGIALATAGLIWFAVSRNRKHRKDIENREQIKQELITAASNVG DLDNEVLTDGNTDVSAESLKANASLHDARKAYEKGDYGAARTHLRVVESTVAKANRKLHPGQREPEGAGADSSVPAPERK QASVRTTDPETGQTVTISNADYRPTAQPGYPHYFGGGYHNGIFFQPGFYPYPFWGPGWGWALGDVLLMDALLDDHWGGGF ERGFEAGRDAAFADAGSHNAANYDAANYEAANYDGANYDGGYDAGGDIGFDGGWDSGAGWDSGGSDSGGDIGF
Sequences:
>Translated_473_residues MAGREVTSRFAGLALAPVAIALAMLFAPFAGADGYTDQLVARFDSQTHVVADPGARPPLQNPDGLNRQILAGPWRWSSGP PIWVAAVAPAQSGVTTADSIHEAMLRRDAQFSGVILVIDSRGYHVRAYHVPKVVADNVDEFMNQSAQDHRNDPYGAASEF VGKLSGVSVPTRAPVSTSPLVQQQRDDWAWLKAAFVIAGIALATAGLIWFAVSRNRKHRKDIENREQIKQELITAASNVG DLDNEVLTDGNTDVSAESLKANASLHDARKAYEKGDYGAARTHLRVVESTVAKANRKLHPGQREPEGAGADSSVPAPERK QASVRTTDPETGQTVTISNADYRPTAQPGYPHYFGGGYHNGIFFQPGFYPYPFWGPGWGWALGDVLLMDALLDDHWGGGF ERGFEAGRDAAFADAGSHNAANYDAANYEAANYDGANYDGGYDAGGDIGFDGGWDSGAGWDSGGSDSGGDIGF >Mature_472_residues AGREVTSRFAGLALAPVAIALAMLFAPFAGADGYTDQLVARFDSQTHVVADPGARPPLQNPDGLNRQILAGPWRWSSGPP IWVAAVAPAQSGVTTADSIHEAMLRRDAQFSGVILVIDSRGYHVRAYHVPKVVADNVDEFMNQSAQDHRNDPYGAASEFV GKLSGVSVPTRAPVSTSPLVQQQRDDWAWLKAAFVIAGIALATAGLIWFAVSRNRKHRKDIENREQIKQELITAASNVGD LDNEVLTDGNTDVSAESLKANASLHDARKAYEKGDYGAARTHLRVVESTVAKANRKLHPGQREPEGAGADSSVPAPERKQ ASVRTTDPETGQTVTISNADYRPTAQPGYPHYFGGGYHNGIFFQPGFYPYPFWGPGWGWALGDVLLMDALLDDHWGGGFE RGFEAGRDAAFADAGSHNAANYDAANYEAANYDGANYDGGYDAGGDIGFDGGWDSGAGWDSGGSDSGGDIGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50497; Mature: 50366
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGREVTSRFAGLALAPVAIALAMLFAPFAGADGYTDQLVARFDSQTHVVADPGARPPLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC NPDGLNRQILAGPWRWSSGPPIWVAAVAPAQSGVTTADSIHEAMLRRDAQFSGVILVIDS CCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC RGYHVRAYHVPKVVADNVDEFMNQSAQDHRNDPYGAASEFVGKLSGVSVPTRAPVSTSPL CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH VQQQRDDWAWLKAAFVIAGIALATAGLIWFAVSRNRKHRKDIENREQIKQELITAASNVG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCC DLDNEVLTDGNTDVSAESLKANASLHDARKAYEKGDYGAARTHLRVVESTVAKANRKLHP CCCCHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC GQREPEGAGADSSVPAPERKQASVRTTDPETGQTVTISNADYRPTAQPGYPHYFGGGYHN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC GIFFQPGFYPYPFWGPGWGWALGDVLLMDALLDDHWGGGFERGFEAGRDAAFADAGSHNA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC ANYDAANYEAANYDGANYDGGYDAGGDIGFDGGWDSGAGWDSGGSDSGGDIGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGREVTSRFAGLALAPVAIALAMLFAPFAGADGYTDQLVARFDSQTHVVADPGARPPLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC NPDGLNRQILAGPWRWSSGPPIWVAAVAPAQSGVTTADSIHEAMLRRDAQFSGVILVIDS CCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC RGYHVRAYHVPKVVADNVDEFMNQSAQDHRNDPYGAASEFVGKLSGVSVPTRAPVSTSPL CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH VQQQRDDWAWLKAAFVIAGIALATAGLIWFAVSRNRKHRKDIENREQIKQELITAASNVG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCC DLDNEVLTDGNTDVSAESLKANASLHDARKAYEKGDYGAARTHLRVVESTVAKANRKLHP CCCCHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC GQREPEGAGADSSVPAPERKQASVRTTDPETGQTVTISNADYRPTAQPGYPHYFGGGYHN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC GIFFQPGFYPYPFWGPGWGWALGDVLLMDALLDDHWGGGFERGFEAGRDAAFADAGSHNA CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC ANYDAANYEAANYDGANYDGGYDAGGDIGFDGGWDSGAGWDSGGSDSGGDIGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA