| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is nrdH
Identifier: 41409200
GI number: 41409200
Start: 3450384
End: 3450623
Strand: Reverse
Name: nrdH
Synonym: MAP3102c
Alternate gene names: 41409200
Gene position: 3450623-3450384 (Counterclockwise)
Preceding gene: 41409201
Following gene: 41409199
Centisome position: 71.44
GC content: 65.83
Gene sequence:
>240_bases ATGACCATCACCGTGTACACCAAGCCGGCATGCGTGCAGTGCAGCGCCACCTACAAGGCGCTGGACAAGCACGGCATCGC CTACGAGAAGGTCGACATCACGCTCGACCCCGAGGCGCGTGACTACGTGATGGCGCTGGGATACCTGCAGGCTCCCGTCG TGGTGGCCGGAAGCGACCACTGGTCGGGTTTCCGGCCCGATCGGATCAAGGCGCTGGCCGGGGCGGAACTGAGCGCCTAG
Upstream 100 bases:
>100_bases ATCCGGGGGCCTGCCGGATCGCTGAAGGTAGCAAACAAGCAGTCCAAAAGTAGTTGCCAGTCCGTTGGGTTCCCCCTCTT CCGCGAAGGAGCGGCATGCG
Downstream 100 bases:
>100_bases GCAACAGAGCGGCAAGACGTCAGGTAAGGAGGTTGCGCTGCCATGGACAGCACGGGACGCAACCTGGTCTATTTCTCCTC GGTCTCGGAGAACACCCACC
Product: NrdH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTITVYTKPACVQCSATYKALDKHGIAYEKVDITLDPEARDYVMALGYLQAPVVVAGSDHWSGFRPDRIKALAGAELSA
Sequences:
>Translated_79_residues MTITVYTKPACVQCSATYKALDKHGIAYEKVDITLDPEARDYVMALGYLQAPVVVAGSDHWSGFRPDRIKALAGAELSA >Mature_78_residues TITVYTKPACVQCSATYKALDKHGIAYEKVDITLDPEARDYVMALGYLQAPVVVAGSDHWSGFRPDRIKALAGAELSA
Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1789028, Length=79, Percent_Identity=45.5696202531646, Blast_Score=79, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011909 - InterPro: IPR002109 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 8560; Mature: 8429
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITVYTKPACVQCSATYKALDKHGIAYEKVDITLDPEARDYVMALGYLQAPVVVAGSDH CEEEEECCCCEEEECCHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCEEEECCCC WSGFRPDRIKALAGAELSA CCCCCCCCEEEECCCCCCC >Mature Secondary Structure TITVYTKPACVQCSATYKALDKHGIAYEKVDITLDPEARDYVMALGYLQAPVVVAGSDH EEEEECCCCEEEECCHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCEEEECCCC WSGFRPDRIKALAGAELSA CCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8820648; 11677609 [H]