| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mpb64 [H]
Identifier: 41409182
GI number: 41409182
Start: 3431730
End: 3432413
Strand: Reverse
Name: mpb64 [H]
Synonym: MAP3084c
Alternate gene names: 41409182
Gene position: 3432413-3431730 (Counterclockwise)
Preceding gene: 41409183
Following gene: 41409180
Centisome position: 71.07
GC content: 67.84
Gene sequence:
>684_bases ATGCGTTATCTGCTAGCCGCTGCGTTGCTCGCGCCGGCGGTCTTGTTGGGCTGGCCGGCCGCCGCCGAGCCCCCGTCGTG CGCCGCCCTCGGCGGCAGCCTCGAGGACGGGCAGATGTGCCGGCTGCGCGCCGCCGGGCCCAACTACACCATCAACATGG TGTTTCCCGCCGACTACCCCGACGAGCAGGCCCTGACCGACTACATCACCCAGAACCGGGACGGCTTCGTCAACGTCGCG CAGAGTTCCGGCGGGCGGGATCAGCCCTACCAGTTGGAGGCCACCACCGAGCAGCACAGCGGCGGGCAGCCGCCGCACAA CACCCGCAGCGTCGTGCTCAAGTTCTTCCAGGACGTCGGGGGAACCCGGTCGTCGATCTGGTACAAGGCGTTCAACTACA ACCTGGGCACCAAGCAGCCGCTGACCTTCGACAATCTGTTTGCGCCCAACGCCGCCCCGCTGGACGCGATCTTCCCGATC GTGCAGCGCGACCTGGAACGCCAAACCCCGTTGGGCGCCGCGATTTTGCCCTCCACCGGGCATGACCCGTCGCACTACCA GAACTTCGCCATCACCGACGACCAGCTGATCTTCTACTTCGCCCCCGGCGAGATGCTGCCGGCGTTCGGCGGGCCGGTGC AGGCCCAGGTGCCGCGCAACGCGATCCCACCGCTGGCGATCTAA
Upstream 100 bases:
>100_bases GGCGTTCGTCTGCCAACCCTCCCGGTAGCGCCCGGGTACGCTGGCGGCGGTCCCATTTCCGCCGCCCCCGCCCTGGCACG TCTGCGAGGACAAATCCACG
Downstream 100 bases:
>100_bases CCGGCTCAGACCGGTCCGGCCCGCAGCTCCATCGCCGCGGCGGCGACCGCCAACGCCACCTGCGCCAGGCAGCCGATGAT CGGGACGAAAAACGCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Antigen MPB64 [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRYLLAAALLAPAVLLGWPAAAEPPSCAALGGSLEDGQMCRLRAAGPNYTINMVFPADYPDEQALTDYITQNRDGFVNVA QSSGGRDQPYQLEATTEQHSGGQPPHNTRSVVLKFFQDVGGTRSSIWYKAFNYNLGTKQPLTFDNLFAPNAAPLDAIFPI VQRDLERQTPLGAAILPSTGHDPSHYQNFAITDDQLIFYFAPGEMLPAFGGPVQAQVPRNAIPPLAI
Sequences:
>Translated_227_residues MRYLLAAALLAPAVLLGWPAAAEPPSCAALGGSLEDGQMCRLRAAGPNYTINMVFPADYPDEQALTDYITQNRDGFVNVA QSSGGRDQPYQLEATTEQHSGGQPPHNTRSVVLKFFQDVGGTRSSIWYKAFNYNLGTKQPLTFDNLFAPNAAPLDAIFPI VQRDLERQTPLGAAILPSTGHDPSHYQNFAITDDQLIFYFAPGEMLPAFGGPVQAQVPRNAIPPLAI >Mature_227_residues MRYLLAAALLAPAVLLGWPAAAEPPSCAALGGSLEDGQMCRLRAAGPNYTINMVFPADYPDEQALTDYITQNRDGFVNVA QSSGGRDQPYQLEATTEQHSGGQPPHNTRSVVLKFFQDVGGTRSSIWYKAFNYNLGTKQPLTFDNLFAPNAAPLDAIFPI VQRDLERQTPLGAAILPSTGHDPSHYQNFAITDDQLIFYFAPGEMLPAFGGPVQAQVPRNAIPPLAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021729 [H]
Pfam domain/function: PF11738 DUF3298 [H]
EC number: NA
Molecular weight: Translated: 24575; Mature: 24575
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLAAALLAPAVLLGWPAAAEPPSCAALGGSLEDGQMCRLRAAGPNYTINMVFPADYP CHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCC DEQALTDYITQNRDGFVNVAQSSGGRDQPYQLEATTEQHSGGQPPHNTRSVVLKFFQDVG CHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GTRSSIWYKAFNYNLGTKQPLTFDNLFAPNAAPLDAIFPIVQRDLERQTPLGAAILPSTG CCCHHEEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC HDPSHYQNFAITDDQLIFYFAPGEMLPAFGGPVQAQVPRNAIPPLAI CCHHHCCCEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MRYLLAAALLAPAVLLGWPAAAEPPSCAALGGSLEDGQMCRLRAAGPNYTINMVFPADYP CHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCC DEQALTDYITQNRDGFVNVAQSSGGRDQPYQLEATTEQHSGGQPPHNTRSVVLKFFQDVG CHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GTRSSIWYKAFNYNLGTKQPLTFDNLFAPNAAPLDAIFPIVQRDLERQTPLGAAILPSTG CCCHHEEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC HDPSHYQNFAITDDQLIFYFAPGEMLPAFGGPVQAQVPRNAIPPLAI CCHHHCCCEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2642468; 12788972; 3514457 [H]