| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is wbbJ [C]
Identifier: 41409180
GI number: 41409180
Start: 3429167
End: 3429931
Strand: Reverse
Name: wbbJ [C]
Synonym: MAP3082c
Alternate gene names: 41409180
Gene position: 3429931-3429167 (Counterclockwise)
Preceding gene: 41409182
Following gene: 41409177
Centisome position: 71.02
GC content: 66.27
Gene sequence:
>765_bases GTGGCTGCTTCGATAGGCTGTCCGGCCATGACGACCATGTGGGGCGCTCCACTCCATCGCCGTTGGCGTGGATCGAATCT GCGCGACCCGCGCCAGGCCAAGTTCCTCACCCTGGCCTCGCTGAAATGGGTGCTGCGCAACCGCGCCTACACCCCCTGGT ACCTGGTGCGGTATTGGCGGCTGCTGAAGTTCAAGCTGGCCAACCCGCACATCATTACCCGCGGCATGGTGTTTCTGGGC AAGGGCGTGGAGATCCATGCCACGCCCGAGCTCGCGCAGCTCGAGATCGGCCGCTGGGTGCACATCGGCGACAAGAACAC CATCCGCGCGCACGAGGGCTCGCTGCGGTTCGGTGACAAGGTGGTGCTGGGCCGCGACAACGTGATCAACGCCTACCTGG ACATCGAGCTCGGCGATTCGGTGCTGATGGCCGACTGGTGCTACGTCTGCGATTTCGACCACCGCATGGACGACATCAAC GTCCCGATTAAGGACCAGGGGATCGTCAAGTCCCCGGTCCGCATCGGGCCGGACACCTGGGTGGGGGTGAAGGTGACGGT GCTGCGCGGCACCTCCATCGGGCGCGGCTGCGTGCTCGGCTCGCACGCGGTGGTCCGCGGTGTCATCCCGGACTACTCGA TCGCGGTCGGCGCACCGGCCAAGGTGGTCAAGAATCGTCAGCTGTCCTGGGAGAGTTCGGCCGCGCAGCGGGCCGAGCTG GCCGCCGCGCTGGCCGACATCGAACGAAAGAAGGCCTCCCGCTAG
Upstream 100 bases:
>100_bases AGGAGTTGTCGGGCAAGCACCTCGATTTCCCAAATCCTTCCGCGGCCGTCGGCTTGACTCGCCTCGATGAGCAGCGATCG AGTACAGGTGAGGGTAACCC
Downstream 100 bases:
>100_bases CTTTTTGGTTGCGGCTGCTCGTCCACCTTGAAATGGAAGTTGACGTCGCCCGCGTCGACGTCGGGTGCCCGGACGGCGGT TCACATGCTCCGATAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAASIGCPAMTTMWGAPLHRRWRGSNLRDPRQAKFLTLASLKWVLRNRAYTPWYLVRYWRLLKFKLANPHIITRGMVFLG KGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINAYLDIELGDSVLMADWCYVCDFDHRMDDIN VPIKDQGIVKSPVRIGPDTWVGVKVTVLRGTSIGRGCVLGSHAVVRGVIPDYSIAVGAPAKVVKNRQLSWESSAAQRAEL AAALADIERKKASR
Sequences:
>Translated_254_residues MAASIGCPAMTTMWGAPLHRRWRGSNLRDPRQAKFLTLASLKWVLRNRAYTPWYLVRYWRLLKFKLANPHIITRGMVFLG KGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINAYLDIELGDSVLMADWCYVCDFDHRMDDIN VPIKDQGIVKSPVRIGPDTWVGVKVTVLRGTSIGRGCVLGSHAVVRGVIPDYSIAVGAPAKVVKNRQLSWESSAAQRAEL AAALADIERKKASR >Mature_253_residues AASIGCPAMTTMWGAPLHRRWRGSNLRDPRQAKFLTLASLKWVLRNRAYTPWYLVRYWRLLKFKLANPHIITRGMVFLGK GVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINAYLDIELGDSVLMADWCYVCDFDHRMDDINV PIKDQGIVKSPVRIGPDTWVGVKVTVLRGTSIGRGCVLGSHAVVRGVIPDYSIAVGAPAKVVKNRQLSWESSAAQRAELA AALADIERKKASR
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=122, Percent_Identity=36.8852459016393, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 28360; Mature: 28229
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASIGCPAMTTMWGAPLHRRWRGSNLRDPRQAKFLTLASLKWVLRNRAYTPWYLVRYWR CCCCCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLKFKLANPHIITRGMVFLGKGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDK HHHEECCCCEEEECCEEEEECCEEEEECCCCEEEECCCEEEECCCCEEEECCCCCEECCE VVLGRDNVINAYLDIELGDSVLMADWCYVCDFDHRMDDINVPIKDQGIVKSPVRIGPDTW EEECCCCEEEEEEEEEECCCEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCE VGVKVTVLRGTSIGRGCVLGSHAVVRGVIPDYSIAVGAPAKVVKNRQLSWESSAAQRAEL EEEEEEEEECCCCCCCEEECCCHHEEECCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHH AAALADIERKKASR HHHHHHHHHHHCCC >Mature Secondary Structure AASIGCPAMTTMWGAPLHRRWRGSNLRDPRQAKFLTLASLKWVLRNRAYTPWYLVRYWR CCCCCCCHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLKFKLANPHIITRGMVFLGKGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDK HHHEECCCCEEEECCEEEEECCEEEEECCCCEEEECCCEEEECCCCEEEECCCCCEECCE VVLGRDNVINAYLDIELGDSVLMADWCYVCDFDHRMDDINVPIKDQGIVKSPVRIGPDTW EEECCCCEEEEEEEEEECCCEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCE VGVKVTVLRGTSIGRGCVLGSHAVVRGVIPDYSIAVGAPAKVVKNRQLSWESSAAQRAEL EEEEEEEEECCCCCCCEEECCCHHEEECCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHH AAALADIERKKASR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]