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The map label for this gene is 41409171

Identifier: 41409171

GI number: 41409171

Start: 3418547

End: 3418858

Strand: Direct

Name: 41409171

Synonym: MAP3073

Alternate gene names: NA

Gene position: 3418547-3418858 (Clockwise)

Preceding gene: 41409170

Following gene: 41409172

Centisome position: 70.78

GC content: 66.67

Gene sequence:

>312_bases
ATGACCGGCCTGGGCTACACCCTGCCGGCCGCACTGGCGGTGGTGATCGTGTGCGCCGCGGAGTTGACGGTGCTGCGGAC
CGGGCTCTTTCGCCGGCCGGCCTACTGGCTGTCGATGCTCATCGTGCTGGGATTCCAGGTGCCGGTGGACGGCTGGCTGA
CCAAACGCAGCTCGCCCGTGGTGATCTACGACGACCGGCAGATCAGCGGGTTGCGTTTCCCGTTCGACATCCCGGTGGAG
GATTTTCTGTTCGGCTTCGCGATGGTCACCGCGGTGCTGCTGCTCTGGGAACGACGACGTGCGCGCCGGTGA

Upstream 100 bases:

>100_bases
GGGTGCCGATCGAAGAGTTGCTGTTCTTTCTCATCATCCCGGTGTGTGCGGTGCTGACCTACAACGCGGTGAGCACCATC
CTGGACAAGGTGCGCCGCCG

Downstream 100 bases:

>100_bases
CACGCGCCCCGCCCCGGGCAACCTGGCGGCCGCGTTCGACGCCGGCGCCGCGACCTACGACCGGCTGGTCGGCGCCAGCC
CGGGCTACCATGCGCAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Lycopene Cyclase CrtYd; Lycopene Cyclase; Lycopene Cyclase Domain-Containing Protein

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTGLGYTLPAALAVVIVCAAELTVLRTGLFRRPAYWLSMLIVLGFQVPVDGWLTKRSSPVVIYDDRQISGLRFPFDIPVE
DFLFGFAMVTAVLLLWERRRARR

Sequences:

>Translated_103_residues
MTGLGYTLPAALAVVIVCAAELTVLRTGLFRRPAYWLSMLIVLGFQVPVDGWLTKRSSPVVIYDDRQISGLRFPFDIPVE
DFLFGFAMVTAVLLLWERRRARR
>Mature_102_residues
TGLGYTLPAALAVVIVCAAELTVLRTGLFRRPAYWLSMLIVLGFQVPVDGWLTKRSSPVVIYDDRQISGLRFPFDIPVED
FLFGFAMVTAVLLLWERRRARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11688; Mature: 11557

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLGYTLPAALAVVIVCAAELTVLRTGLFRRPAYWLSMLIVLGFQVPVDGWLTKRSSPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCE
VIYDDRQISGLRFPFDIPVEDFLFGFAMVTAVLLLWERRRARR
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGLGYTLPAALAVVIVCAAELTVLRTGLFRRPAYWLSMLIVLGFQVPVDGWLTKRSSPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCE
VIYDDRQISGLRFPFDIPVEDFLFGFAMVTAVLLLWERRRARR
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA