| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409170
Identifier: 41409170
GI number: 41409170
Start: 3418227
End: 3418550
Strand: Direct
Name: 41409170
Synonym: MAP3072
Alternate gene names: NA
Gene position: 3418227-3418550 (Clockwise)
Preceding gene: 41409169
Following gene: 41409171
Centisome position: 70.77
GC content: 66.98
Gene sequence:
>324_bases ATGAGCGATCGGTGGCAATACCTGGTGGTGCTCGCCGCCTGTCTGGTGGTCACCGCGCCGCTGGAGATCGCGGGTGCGGG CGTCTACCGGAGGTGGCGACGGCTCGCCGCGGCGGTGCTGCCGGTGGCCGCGGTGTTCTTGCTCTGGGATGAGATCGCCG TGGCCGCGCGGGTGTGGACGTACGACCACGCCTACCTGTGCGGGCTGAGCATCCCCGTTCGGGTGCCGATCGAAGAGTTG CTGTTCTTTCTCATCATCCCGGTGTGTGCGGTGCTGACCTACAACGCGGTGAGCACCATCCTGGACAAGGTGCGCCGCCG ATGA
Upstream 100 bases:
>100_bases CCACCGTGGGCACGGCGCGACGGCTGCGGGTCGGCGCGGTGGGGCTGATCCGCTCGTGGCGGGCGCGCAACAGCGGTCGG GGTATTCGGTCGGGGGCCGC
Downstream 100 bases:
>100_bases CCGGCCTGGGCTACACCCTGCCGGCCGCACTGGCGGTGGTGATCGTGTGCGCCGCGGAGTTGACGGTGCTGCGGACCGGG CTCTTTCGCCGGCCGGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSDRWQYLVVLAACLVVTAPLEIAGAGVYRRWRRLAAAVLPVAAVFLLWDEIAVAARVWTYDHAYLCGLSIPVRVPIEEL LFFLIIPVCAVLTYNAVSTILDKVRRR
Sequences:
>Translated_107_residues MSDRWQYLVVLAACLVVTAPLEIAGAGVYRRWRRLAAAVLPVAAVFLLWDEIAVAARVWTYDHAYLCGLSIPVRVPIEEL LFFLIIPVCAVLTYNAVSTILDKVRRR >Mature_106_residues SDRWQYLVVLAACLVVTAPLEIAGAGVYRRWRRLAAAVLPVAAVFLLWDEIAVAARVWTYDHAYLCGLSIPVRVPIEELL FFLIIPVCAVLTYNAVSTILDKVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12043; Mature: 11911
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRWQYLVVLAACLVVTAPLEIAGAGVYRRWRRLAAAVLPVAAVFLLWDEIAVAARVWT CCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDHAYLCGLSIPVRVPIEELLFFLIIPVCAVLTYNAVSTILDKVRRR CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDRWQYLVVLAACLVVTAPLEIAGAGVYRRWRRLAAAVLPVAAVFLLWDEIAVAARVWT CCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDHAYLCGLSIPVRVPIEELLFFLIIPVCAVLTYNAVSTILDKVRRR CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA