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The map label for this gene is yfcH [C]

Identifier: 41409163

GI number: 41409163

Start: 3410686

End: 3411987

Strand: Direct

Name: yfcH [C]

Synonym: MAP3065

Alternate gene names: 41409163

Gene position: 3410686-3411987 (Clockwise)

Preceding gene: 41409162

Following gene: 41409166

Centisome position: 70.62

GC content: 73.81

Gene sequence:

>1302_bases
CTGGCACGCCAGGCCGGGCGCGTTCGAGCGGCTCTCGCCGCCGTGGTCGCCGATACGGCTGTCACCGAGGCCGCCTCGCT
CAAAGACGGGCGCGCCACCCTGGCGCTGCCCGGCGGTCTGCGTTGGGTGGCGGTGCACCAGCCGGACGGCTACCACCCGC
CGCGACGTTTCGTGGACAGCATCGGCGGCGACGGCCTGGCCGCGCTTCCGGCGCGAATCGCGGTGCGCTGGCGGCATATT
CACGAATTCGAGGATGTCGGCGGCGACCGCACCCGGGTGATCGACCGGGTCGAGACGCCGGTGCCCGCGTCGCTGCTGCG
ACCCATGTTCGACTACCGGCACCGCCAACTCGCCGGCGACCTGGCCGCCCACCGGCTGGCCGCCGAGCACGGGTTGCGGC
CACTGACGGTCGCGATCACCGGATCGTCGGGTCTGGTCGGTTCGGCGTTGACCGCGTTCCTGCGGACCGGCGGGCACCGG
GTCATCCGGCTGGTGCGGCGCGCCGCGCGCGGGGGCGACGAGCGGCGGTGGGACCCCGAGGATCCCGACCCGGGGCTGTG
CGACGGTGTCGACGCGGTGGTCCACCTGGCCGGCGCCTCGATCGCCGGGCGGTTCACCGACCGGCATCGAGAAGCCGTCC
GGGACAGCAGGATCGGGCCCACCCGGCGGCTGGCCGAACTGCTGGGCCGCGGCCGGCCCCGGCCCGCCGCGCTGATCTCG
GCGTCGGCGATCGGCTACTACGGGTACGACCGGGGCGACGAAACCCTCACCGAGGACAGCGACCGCGGCGACGGGTTCCT
GGCCGATGTGGTGGCCGACTGGGAACGGGCGATTACGCTGGCGCTGGATGCGGGCGTGCGGGTGGTGCAGGTGCGCACCG
GCATCGTGCAGTCACCGCGCGGCGGCACGCTGAAGCTGATGCGCCCGTTGTTCAGCGCCGGTCTCGGCGGCCGACTGGGC
GACGGGCGGCAATGGCTGTCCTGGATCGGCATCGACGATCTGATCGACGTCTACCACCGGGCGTTGTGGGACAGCAGACT
CAACGGTCCGGTCAATGCCGTTGCGCCGCAACCGGTCCGAAACAGCGAGTACACGACCGCGCTGGCCGCGGTGTTGCACC
GGCCCGCGGTGCTGCCGGTGCCGTCGCTGGGTCCGCGGCTGTTGCTGGGCGGTCAGGGCGCCCGCGAACTCGCGGGCGCG
AGTCAGCGGGTAGCCCCGGCCAAGCTCGCCGCGGCCGGGCACCGGTTTCGCCACCCCGACATCGAGCGGGCGCTGCGTCA
CCTGTTGGGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
GTCGAACACGCCTTGCCCGACCGGTAGCCCGTCCCTACCGTCGAGGGATGGGGCTGCACTACGCGAGCGTCGTGGACGCC
GCCATCACCGAGGTCTTCGA

Downstream 100 bases:

>100_bases
CGGCTTGGACGAACGACCGGGACCGCAACACTACCTCCTCACCGTGTTCGGCTACTGGTCGGCATCTCGGCCGTCGCGGC
TGTGCCGGTAGGCGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MARQAGRVRAALAAVVADTAVTEAASLKDGRATLALPGGLRWVAVHQPDGYHPPRRFVDSIGGDGLAALPARIAVRWRHI
HEFEDVGGDRTRVIDRVETPVPASLLRPMFDYRHRQLAGDLAAHRLAAEHGLRPLTVAITGSSGLVGSALTAFLRTGGHR
VIRLVRRAARGGDERRWDPEDPDPGLCDGVDAVVHLAGASIAGRFTDRHREAVRDSRIGPTRRLAELLGRGRPRPAALIS
ASAIGYYGYDRGDETLTEDSDRGDGFLADVVADWERAITLALDAGVRVVQVRTGIVQSPRGGTLKLMRPLFSAGLGGRLG
DGRQWLSWIGIDDLIDVYHRALWDSRLNGPVNAVAPQPVRNSEYTTALAAVLHRPAVLPVPSLGPRLLLGGQGARELAGA
SQRVAPAKLAAAGHRFRHPDIERALRHLLGRGG

Sequences:

>Translated_433_residues
MARQAGRVRAALAAVVADTAVTEAASLKDGRATLALPGGLRWVAVHQPDGYHPPRRFVDSIGGDGLAALPARIAVRWRHI
HEFEDVGGDRTRVIDRVETPVPASLLRPMFDYRHRQLAGDLAAHRLAAEHGLRPLTVAITGSSGLVGSALTAFLRTGGHR
VIRLVRRAARGGDERRWDPEDPDPGLCDGVDAVVHLAGASIAGRFTDRHREAVRDSRIGPTRRLAELLGRGRPRPAALIS
ASAIGYYGYDRGDETLTEDSDRGDGFLADVVADWERAITLALDAGVRVVQVRTGIVQSPRGGTLKLMRPLFSAGLGGRLG
DGRQWLSWIGIDDLIDVYHRALWDSRLNGPVNAVAPQPVRNSEYTTALAAVLHRPAVLPVPSLGPRLLLGGQGARELAGA
SQRVAPAKLAAAGHRFRHPDIERALRHLLGRGG
>Mature_432_residues
ARQAGRVRAALAAVVADTAVTEAASLKDGRATLALPGGLRWVAVHQPDGYHPPRRFVDSIGGDGLAALPARIAVRWRHIH
EFEDVGGDRTRVIDRVETPVPASLLRPMFDYRHRQLAGDLAAHRLAAEHGLRPLTVAITGSSGLVGSALTAFLRTGGHRV
IRLVRRAARGGDERRWDPEDPDPGLCDGVDAVVHLAGASIAGRFTDRHREAVRDSRIGPTRRLAELLGRGRPRPAALISA
SAIGYYGYDRGDETLTEDSDRGDGFLADVVADWERAITLALDAGVRVVQVRTGIVQSPRGGTLKLMRPLFSAGLGGRLGD
GRQWLSWIGIDDLIDVYHRALWDSRLNGPVNAVAPQPVRNSEYTTALAAVLHRPAVLPVPSLGPRLLLGGQGARELAGAS
QRVAPAKLAAAGHRFRHPDIERALRHLLGRGG

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=297, Percent_Identity=33.6700336700337, Blast_Score=132, Evalue=9e-31,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=39.7993311036789, Blast_Score=184, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28573846, Length=298, Percent_Identity=27.5167785234899, Blast_Score=121, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 46510; Mature: 46378

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQAGRVRAALAAVVADTAVTEAASLKDGRATLALPGGLRWVAVHQPDGYHPPRRFVDS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHH
IGGDGLAALPARIAVRWRHIHEFEDVGGDRTRVIDRVETPVPASLLRPMFDYRHRQLAGD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LAAHRLAAEHGLRPLTVAITGSSGLVGSALTAFLRTGGHRVIRLVRRAARGGDERRWDPE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
DPDPGLCDGVDAVVHLAGASIAGRFTDRHREAVRDSRIGPTRRLAELLGRGRPRPAALIS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHEE
ASAIGYYGYDRGDETLTEDSDRGDGFLADVVADWERAITLALDAGVRVVQVRTGIVQSPR
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCC
GGTLKLMRPLFSAGLGGRLGDGRQWLSWIGIDDLIDVYHRALWDSRLNGPVNAVAPQPVR
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSEYTTALAAVLHRPAVLPVPSLGPRLLLGGQGARELAGASQRVAPAKLAAAGHRFRHPD
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCCCCC
IERALRHLLGRGG
HHHHHHHHHCCCC
>Mature Secondary Structure 
ARQAGRVRAALAAVVADTAVTEAASLKDGRATLALPGGLRWVAVHQPDGYHPPRRFVDS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHH
IGGDGLAALPARIAVRWRHIHEFEDVGGDRTRVIDRVETPVPASLLRPMFDYRHRQLAGD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LAAHRLAAEHGLRPLTVAITGSSGLVGSALTAFLRTGGHRVIRLVRRAARGGDERRWDPE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
DPDPGLCDGVDAVVHLAGASIAGRFTDRHREAVRDSRIGPTRRLAELLGRGRPRPAALIS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHEE
ASAIGYYGYDRGDETLTEDSDRGDGFLADVVADWERAITLALDAGVRVVQVRTGIVQSPR
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCC
GGTLKLMRPLFSAGLGGRLGDGRQWLSWIGIDDLIDVYHRALWDSRLNGPVNAVAPQPVR
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSEYTTALAAVLHRPAVLPVPSLGPRLLLGGQGARELAGASQRVAPAKLAAAGHRFRHPD
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHCCCCCCCC
IERALRHLLGRGG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]