| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mhqP [H]
Identifier: 41409138
GI number: 41409138
Start: 3381593
End: 3382453
Strand: Reverse
Name: mhqP [H]
Synonym: MAP3040c
Alternate gene names: 41409138
Gene position: 3382453-3381593 (Counterclockwise)
Preceding gene: 41409140
Following gene: 41409137
Centisome position: 70.03
GC content: 72.13
Gene sequence:
>861_bases GTGACCAGTCAACCGAATGACGCACATTGGCAGCGGCCCGGCGAATCCCCGGAGCCAACCCCGGGACGCCCCGCCTCGGC ACGGCTGGTCGATCCCGAAGATGACCTGACCCCGGTCGGATACCCCGGCGACTTCAATCCGTCCACCGGGACCACCACCG TCATCCCCTACGGCGGCGCCGCCGCGGTCGCCGGCTCCGGGGCCGCGGGCTACCACCTGCTCGAACAGCAGGAGCCGTTG CCCTACGTCCAGCCGCATTCGGCGGCCCGGCACGCGGCCCCCGAGCCGACCGACGTCGACGACGACGAGCACCACGACCG GTTGCTCGACGTCGGCCGGCGCGGAACCCAGCACCTGGGTTTGCTGGTGTTGCGGGCCGGGCTGGGCGTGGTGCTGGGCG CCCACGGGCTGCAGAAGCTGTTCGGCTGGTGGGGCGGCTCGGGCGTGACGGGACTCCGGAACTCACTGTCCGACGTCGGC TACCAGCACGCCGACATCCTGGCCTACGTCAGTGCCGGCGGCGAGCTGGTGGCCGGGGTGCTGCTGGTGCTGGGCCTGTT CACCCCGCTGGCCGCGGCGGGCGCGCTGGCGTTCTTGATCAACGGCCTGCTGGCGACGGTCTCGGCGCGGCCGCACGCGC ACACCTTCTCGTTCTTCCTGCCGCAGGGGCACGAATACCAGATCACCCTCATCGTGATGGCGACCGCGGTCATCCTGTGC GGACCGGGCCGCTACGGCCTGGACGCGCGGCGCGGCTGGGCGCACCGGCCCTTCATCGGGTCGTTCGTCGCCCTGCTGGC CGGCATCGCCGCCGGTGTCGGGGTGTGGGTGGCGCTCAACGGCGTGAATCCGATCGGCTGA
Upstream 100 bases:
>100_bases GGGCCCCGGCGGGCCCATTTGGCGGGCAAACCGCCGATTGCCTGGCGAAAGCGCCGCTCAAATCCCCAATTCGGGGCCAA CTGCCCTTACCCTGACACCC
Downstream 100 bases:
>100_bases GCGGCGTTTTCACCGGTTTCACTGGTACGGGTTGGGCACCCGGCCGGCGCTGGCCCGGGTCAGCTCCGGCAGCGTCGCGA ACGTGACCGCCGGCAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAAAVAGSGAAGYHLLEQQEPL PYVQPHSAARHAAPEPTDVDDDEHHDRLLDVGRRGTQHLGLLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVG YQHADILAYVSAGGELVAGVLLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILC GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPIG
Sequences:
>Translated_286_residues MTSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAAAVAGSGAAGYHLLEQQEPL PYVQPHSAARHAAPEPTDVDDDEHHDRLLDVGRRGTQHLGLLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVG YQHADILAYVSAGGELVAGVLLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILC GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPIG >Mature_285_residues TSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGAAAVAGSGAAGYHLLEQQEPLP YVQPHSAARHAAPEPTDVDDDEHHDRLLDVGRRGTQHLGLLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGY QHADILAYVSAGGELVAGVLLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILCG PGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPIG
Specific function: Putative oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 29766; Mature: 29635
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH AAVAGSGAAGYHLLEQQEPLPYVQPHSAARHAAPEPTDVDDDEHHDRLLDVGRRGTQHLG HHHCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH LLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGYQHADILAYVSAGGELVAGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH LLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHC GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPIG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCC >Mature Secondary Structure TSQPNDAHWQRPGESPEPTPGRPASARLVDPEDDLTPVGYPGDFNPSTGTTTVIPYGGA CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH AAVAGSGAAGYHLLEQQEPLPYVQPHSAARHAAPEPTDVDDDEHHDRLLDVGRRGTQHLG HHHCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH LLVLRAGLGVVLGAHGLQKLFGWWGGSGVTGLRNSLSDVGYQHADILAYVSAGGELVAGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH LLVLGLFTPLAAAGALAFLINGLLATVSARPHAHTFSFFLPQGHEYQITLIVMATAVILC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHC GPGRYGLDARRGWAHRPFIGSFVALLAGIAAGVGVWVALNGVNPIG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9341680; 9384377 [H]