Click here to switch to the map view.

The map label for this gene is p49 [H]

Identifier: 41409132

GI number: 41409132

Start: 3375369

End: 3376796

Strand: Direct

Name: p49 [H]

Synonym: MAP3034

Alternate gene names: 41409132

Gene position: 3375369-3376796 (Clockwise)

Preceding gene: 41409129

Following gene: 41409133

Centisome position: 69.89

GC content: 73.18

Gene sequence:

>1428_bases
GTGGACGTCACCATCGTCGGCAGCGGACCCAACGGGCTGACCGCTGCGCTCATCTGCGCCCGGGCCGGCCTGAAAGTGCA
GGTCGTGGAAGCTCAACCGACCTTCGGTGGCGGCGCGCGCACCGCGGCCGACCCCGACTCAGCGGGAGTTTTGCACGACA
TCTGCTCGGCGGTGCATCCGCTGGCACTGGCCTCGCCGTTCTTCGCCGAGTTCGACCTGCCCGCCCGCGGCGTGCAACTG
GCGGTGCCGGAGATCTCCTACGCCAACCCGCTGCCGGGCCGCCCGGCGGCGATCGCCTACCGCGATCTGGACCGCACCTG
CGCCGAACTGGAGCACGGCGCGTCCTTCCGGCGGTTGCTCGGCCCGTTGGTCGCCCGCTCCGACGACGTGGTGGCCCTGC
TGCTGGGCGACAAGCGTTCGCTGCCGAACTCGCCGACGTCGGCGTTGCGGCTCGGGCTGCGGATGCTCGCCCAGGGCACG
CCCGCCTGGGGGACGCTGGCCGGCGAGGACGCCCGCGCGCTGTTCACCGGCGTTGCCGCCCATATCATTTCGCGGATGCC
CTCGTTGACGGCGGCCGGCGCCGGGTTGATGCTGGCCACGCTGGCGCATTCGGTCGGCTGGCCGATCCCGGTCGGCGGCA
GCCAGGCGATCACCGACGCGCTGATCGCCGACCTGCGCGCGCACGGCGGCGAACTCACCGCGGGCGCCGAGGTCACCGAA
CCGCCGGGCGGTGTGGTCGCCTACGACACAGCGCCGACCGCCCTGCTGCGGATCTACGGTGACGCTCTGCCACCTCGGTA
CGCGAAAGCGTTGCGGCGCTACACCTTTGGGCCTGGTGTCGCCAAGGTCGACTTCGTGCTTTCCGACGAGATCCCGTGGT
CGGACCCGCGGCTGCGGCAGGCCCCCACCCTGCACCTGGGCGGCACCCGGGAGCAGATGGCCCGCGCCGAGGCCGACATC
GCCGCCGGCCGGCACGCGCAGTGGCCGATGGTGCTGGCCGCCTCCCCGCACGTCGCCGACCCCGGCCGCATCGACGCCGC
CGGCCGTCGCCCGTTCTGGACCTACGCCCACGTGCCGGCGGGGTCCACACTCGACGCCACCGAGGCCGTCACCGCGGTGG
TCGAGCGGTTCGCGCCCGGTTTCCGCGACGTCGTGGTCGCGGCGCGCGCGATACCGGCCGCCCGGTTGTGCGATCACAAC
GCCAACTACGTGGGCGGCGACATCGGGATCGGCGGCAACTCCGCGTGGCGGGCGATCGCGGGGCCCACGCCACGGGTAAA
CCCTTGGAGCACACCGATTCCCAAGGTGTATCTGTGCTCCGCGGCCACCCCGCCCGGCGGGGGCGTGCACGGCATGGCCG
GCTACTACGCCGCCCGCACGCTGTTGCGCCGCGAGTTCGGCCTCGGCATGCCTAGGCTGGCTCCATGA

Upstream 100 bases:

>100_bases
ACCTGGTCGCCCAAGGCCGCGACGGTTGATTCGGCGAGTTTGTCGGCAATGAGTACAACTGGCAGATTCACCCGGCCAGC
CTATCGGCTGTAATTGACGG

Downstream 100 bases:

>100_bases
CCAAACTCGCGATCATCTACTACTCGGCCACCGGACATGGCACCACGATGGCGCGACGCGTCGCCGCGGCCGCCGAGTCG
GCCGGGGCGCAGGTCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MDVTIVGSGPNGLTAALICARAGLKVQVVEAQPTFGGGARTAADPDSAGVLHDICSAVHPLALASPFFAEFDLPARGVQL
AVPEISYANPLPGRPAAIAYRDLDRTCAELEHGASFRRLLGPLVARSDDVVALLLGDKRSLPNSPTSALRLGLRMLAQGT
PAWGTLAGEDARALFTGVAAHIISRMPSLTAAGAGLMLATLAHSVGWPIPVGGSQAITDALIADLRAHGGELTAGAEVTE
PPGGVVAYDTAPTALLRIYGDALPPRYAKALRRYTFGPGVAKVDFVLSDEIPWSDPRLRQAPTLHLGGTREQMARAEADI
AAGRHAQWPMVLAASPHVADPGRIDAAGRRPFWTYAHVPAGSTLDATEAVTAVVERFAPGFRDVVVAARAIPAARLCDHN
ANYVGGDIGIGGNSAWRAIAGPTPRVNPWSTPIPKVYLCSAATPPGGGVHGMAGYYAARTLLRREFGLGMPRLAP

Sequences:

>Translated_475_residues
MDVTIVGSGPNGLTAALICARAGLKVQVVEAQPTFGGGARTAADPDSAGVLHDICSAVHPLALASPFFAEFDLPARGVQL
AVPEISYANPLPGRPAAIAYRDLDRTCAELEHGASFRRLLGPLVARSDDVVALLLGDKRSLPNSPTSALRLGLRMLAQGT
PAWGTLAGEDARALFTGVAAHIISRMPSLTAAGAGLMLATLAHSVGWPIPVGGSQAITDALIADLRAHGGELTAGAEVTE
PPGGVVAYDTAPTALLRIYGDALPPRYAKALRRYTFGPGVAKVDFVLSDEIPWSDPRLRQAPTLHLGGTREQMARAEADI
AAGRHAQWPMVLAASPHVADPGRIDAAGRRPFWTYAHVPAGSTLDATEAVTAVVERFAPGFRDVVVAARAIPAARLCDHN
ANYVGGDIGIGGNSAWRAIAGPTPRVNPWSTPIPKVYLCSAATPPGGGVHGMAGYYAARTLLRREFGLGMPRLAP
>Mature_475_residues
MDVTIVGSGPNGLTAALICARAGLKVQVVEAQPTFGGGARTAADPDSAGVLHDICSAVHPLALASPFFAEFDLPARGVQL
AVPEISYANPLPGRPAAIAYRDLDRTCAELEHGASFRRLLGPLVARSDDVVALLLGDKRSLPNSPTSALRLGLRMLAQGT
PAWGTLAGEDARALFTGVAAHIISRMPSLTAAGAGLMLATLAHSVGWPIPVGGSQAITDALIADLRAHGGELTAGAEVTE
PPGGVVAYDTAPTALLRIYGDALPPRYAKALRRYTFGPGVAKVDFVLSDEIPWSDPRLRQAPTLHLGGTREQMARAEADI
AAGRHAQWPMVLAASPHVADPGRIDAAGRRPFWTYAHVPAGSTLDATEAVTAVVERFAPGFRDVVVAARAIPAARLCDHN
ANYVGGDIGIGGNSAWRAIAGPTPRVNPWSTPIPKVYLCSAATPPGGGVHGMAGYYAARTLLRREFGLGMPRLAP

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49366; Mature: 49366

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTIVGSGPNGLTAALICARAGLKVQVVEAQPTFGGGARTAADPDSAGVLHDICSAVHP
CCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALASPFFAEFDLPARGVQLAVPEISYANPLPGRPAAIAYRDLDRTCAELEHGASFRRLL
HHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHH
GPLVARSDDVVALLLGDKRSLPNSPTSALRLGLRMLAQGTPAWGTLAGEDARALFTGVAA
HHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
HIISRMPSLTAAGAGLMLATLAHSVGWPIPVGGSQAITDALIADLRAHGGELTAGAEVTE
HHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCC
PPGGVVAYDTAPTALLRIYGDALPPRYAKALRRYTFGPGVAKVDFVLSDEIPWSDPRLRQ
CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCC
APTLHLGGTREQMARAEADIAAGRHAQWPMVLAASPHVADPGRIDAAGRRPFWTYAHVPA
CCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
GSTLDATEAVTAVVERFAPGFRDVVVAARAIPAARLCDHNANYVGGDIGIGGNSAWRAIA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCEECCCCCCCCCCC
GPTPRVNPWSTPIPKVYLCSAATPPGGGVHGMAGYYAARTLLRREFGLGMPRLAP
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDVTIVGSGPNGLTAALICARAGLKVQVVEAQPTFGGGARTAADPDSAGVLHDICSAVHP
CCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALASPFFAEFDLPARGVQLAVPEISYANPLPGRPAAIAYRDLDRTCAELEHGASFRRLL
HHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHH
GPLVARSDDVVALLLGDKRSLPNSPTSALRLGLRMLAQGTPAWGTLAGEDARALFTGVAA
HHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
HIISRMPSLTAAGAGLMLATLAHSVGWPIPVGGSQAITDALIADLRAHGGELTAGAEVTE
HHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCC
PPGGVVAYDTAPTALLRIYGDALPPRYAKALRRYTFGPGVAKVDFVLSDEIPWSDPRLRQ
CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCC
APTLHLGGTREQMARAEADIAAGRHAQWPMVLAASPHVADPGRIDAAGRRPFWTYAHVPA
CCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
GSTLDATEAVTAVVERFAPGFRDVVVAARAIPAARLCDHNANYVGGDIGIGGNSAWRAIA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCEECCCCCCCCCCC
GPTPRVNPWSTPIPKVYLCSAATPPGGGVHGMAGYYAARTLLRREFGLGMPRLAP
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]