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The map label for this gene is 41409094

Identifier: 41409094

GI number: 41409094

Start: 3332773

End: 3333402

Strand: Reverse

Name: 41409094

Synonym: MAP2996c

Alternate gene names: NA

Gene position: 3333402-3332773 (Counterclockwise)

Preceding gene: 41409095

Following gene: 41409093

Centisome position: 69.02

GC content: 72.06

Gene sequence:

>630_bases
CTGGAATTGTGCGGTCGGCGCCGTAGGATTTCTGATATGACGCGGCAGCACAGCACATCGTCGGTCCGCGGCGCAGCGCC
CCGGCCAGCCTCCCCGATGACGTTCGACATCACCCGGCCGGGGCGGCGGCCCGGGGCGATGGTCACCCTGCGCACGACCG
TGCCCAGCCCGGCGCGCATCGGGCTGGACATGATCGCGATCGAGGCGGGCGCCCCGCTGGATCTGGACCTGCAGGTCCAG
TCGGTGTCCGAGGGCGTCCTGGTGACCGGCTCGGTGACCGGGCCCACCGTCGGCGAATGCGCGCGCTGCCTGACCGCCCT
GGACGGCGAGGTGCGGGTGCGGCTGACCGAACTGTTCGCCTACCCGGACAGCACCACCGAGGCGACCACCGAGGAGGACG
AGGTCGGCCACATCGTCGACGACACCGTCGACCTCGAGCAGTCCATCATCGACGCGGTGGGCCTCGAGCTGCCCTTCTCA
CCCGTGTGCCGGCCGGACTGCCCGGGGCTGTGCCCGGAATGCGGCGTGTCGCTGGCTGCCGAGCCCGGCCACCAGCACGA
CCGCATCGACCCGCGCTGGGCGAAGCTGGCGGGCATGTTCGCGTCCGACGAAGCCCGGGACGAGCGGTGA

Upstream 100 bases:

>100_bases
CGCTGCGCTCGGTGGGCCGCGGCCGTCACCAGCTGCGGACGGCGGCCGGCACGCACGACTACGCGGTGCGGTAGCACCAC
CCTGGCGGGGCGGACGCGCC

Downstream 100 bases:

>100_bases
GCTCACGGCAGCCGCTGCTCGACGCCCTCGGGGTCGAGCTGCCCGACGAGCTGCTGTCGTTGGCCCTGACGCATCGCAGC
TACGCCTACGAACACGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MELCGRRRRISDMTRQHSTSSVRGAAPRPASPMTFDITRPGRRPGAMVTLRTTVPSPARIGLDMIAIEAGAPLDLDLQVQ
SVSEGVLVTGSVTGPTVGECARCLTALDGEVRVRLTELFAYPDSTTEATTEEDEVGHIVDDTVDLEQSIIDAVGLELPFS
PVCRPDCPGLCPECGVSLAAEPGHQHDRIDPRWAKLAGMFASDEARDER

Sequences:

>Translated_209_residues
MELCGRRRRISDMTRQHSTSSVRGAAPRPASPMTFDITRPGRRPGAMVTLRTTVPSPARIGLDMIAIEAGAPLDLDLQVQ
SVSEGVLVTGSVTGPTVGECARCLTALDGEVRVRLTELFAYPDSTTEATTEEDEVGHIVDDTVDLEQSIIDAVGLELPFS
PVCRPDCPGLCPECGVSLAAEPGHQHDRIDPRWAKLAGMFASDEARDER
>Mature_209_residues
MELCGRRRRISDMTRQHSTSSVRGAAPRPASPMTFDITRPGRRPGAMVTLRTTVPSPARIGLDMIAIEAGAPLDLDLQVQ
SVSEGVLVTGSVTGPTVGECARCLTALDGEVRVRLTELFAYPDSTTEATTEEDEVGHIVDDTVDLEQSIIDAVGLELPFS
PVCRPDCPGLCPECGVSLAAEPGHQHDRIDPRWAKLAGMFASDEARDER

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1660 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 22466; Mature: 22466

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELCGRRRRISDMTRQHSTSSVRGAAPRPASPMTFDITRPGRRPGAMVTLRTTVPSPARI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHC
GLDMIAIEAGAPLDLDLQVQSVSEGVLVTGSVTGPTVGECARCLTALDGEVRVRLTELFA
CEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
YPDSTTEATTEEDEVGHIVDDTVDLEQSIIDAVGLELPFSPVCRPDCPGLCPECGVSLAA
CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEC
EPGHQHDRIDPRWAKLAGMFASDEARDER
CCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELCGRRRRISDMTRQHSTSSVRGAAPRPASPMTFDITRPGRRPGAMVTLRTTVPSPARI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHC
GLDMIAIEAGAPLDLDLQVQSVSEGVLVTGSVTGPTVGECARCLTALDGEVRVRLTELFA
CEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
YPDSTTEATTEEDEVGHIVDDTVDLEQSIIDAVGLELPFSPVCRPDCPGLCPECGVSLAA
CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEC
EPGHQHDRIDPRWAKLAGMFASDEARDER
CCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]