Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409083

Identifier: 41409083

GI number: 41409083

Start: 3318264

End: 3320036

Strand: Direct

Name: 41409083

Synonym: MAP2985

Alternate gene names: NA

Gene position: 3318264-3320036 (Clockwise)

Preceding gene: 41409082

Following gene: 41409091

Centisome position: 68.7

GC content: 73.27

Gene sequence:

>1773_bases
CTGGCCGCGTCGAGGAGCAACGATTGGGGGCCTGTGTCGGTGCCGGTCAGCAGCTTGGATCCGCGCGCCGGCAACGACCA
CAGCGACCGCTCCGGTGCGCTGCGCGGCTGGCAGCGCCGGGCGCTGGTGAAATATCTCGCCGGGCAGCCCCGCGATTTCC
TGGCGGTGGCGACCCCGGGCTCGGGCAAGACGACGTTCGCGCTGCGGGTGGCCGCCGAACTGCTCGGCCAGCGCGCCGTC
GAGCAGGTCACCGTCGTGGTGCCCACCGAGCACCTCAAGGTGCAGTGGGCGCAGGCCGCGGCGCGGCACGGCCTGGCGCT
GGACCCGCGGTTCTCCAACAGCAACCCGCGGATCGCGCCGGAGTACCACGGCGTGATGGTGACCTACGCTCAGGTCGCCG
CGCACCCCACGCTGCACCGGGTGCGCACCGAGCAGCGCAGGACGCTGGTCATCTTCGACGAGATCCATCACGGCGGCGAC
GCCAAGACGTGGGGCGATGCCATTCGCGAGGCGTTCGGCGACGCCACCCGCCGGCTCGCGTTGACGGGCACGCCGTTTCG
CAGCGACGACAGCCCCATCCCGTTCGTGCGCTACGAGGCCGGACCCGACGGGGTGCGCCGCTCGCAGGCCAACCACACCT
ACGGCTATCCCGAGGCGTTGGCCGACGGCGTGGTGCGGCCGGTGGTCTTTCTGGCCTACTCCGGGGAGGCACGCTGGCGC
GACAGCGCCGGCGAGGAGCACGCGGCGCGGCTGGGCGAGCCGCTGTCGGCCGAGCAGACCGCGCGGGCCTGGCGCACCGC
GCTGGACCCGGCCGGGGAATGGATGCCCGCGGTCATCGCGGCGGCCGACCAGCGGCTGCGCCAGCTGCGTGCCCACATTC
CCGACGCCGGCGGCATGATCATCGCCTCCGACCGGGTCGCGGCCCGCGCCTACGCGACCCTGCTGACCAAGATCACCTCG
GAGACGCCGACCGTGGTGCTCTCCGACGACCCCGGATCCTCGGCGCGCATCAGCGAATTCGCGGCGAGCACCAGCCGGTG
GCTGGTGGCGGTGCGGATGGTCTCCGAGGGCGTCGACGTGCCGCGGCTGTCGGTCGGCATCTACGCCACCAGCGCCTCCA
CGCCGCTGTTCTTCGCCCAGGCGGTCGGCCGGTTCGTGCGGTCGCGCCGCCCGGGCGAGACCGCGAGCATCTTCCTGCCG
TCGGTGCCCAACCTGCTGCAACTGGCCAGCGAGCTGGAGGCCCAGCGCAACCACGTGCTGGGCGAGCCGCACCGCGTCTC
CGAGGGCGACCCCCTCGACGGCGACCCGGCCACCCGCACGCAGAACGAGAAGAGCGAACTCGACAACGGCTTCACCTCGC
TGGGGGCCGACGCGGAACTCGATCAGGTCATCTTCGACGGCTCGTCGTTCGGTACCGCCGCCCCGGCCGGCAGCGAGGAG
GAGGCCGACTACCTCGGCATCCCGGGTTTGCTGGACGCCGAGCAGATGCGCGCCCTGCTGCACCAGCGCCAGGACGAGCA
GCTGCAGCGGCGGGCCGGGCAGCCGTCGGCGGGCGACGCCCCGCCGGCGACGGTGCACGGCCAGCTGCGCGAGCTGCGCC
GCGAGCTCAACACGCTGGTGTCGATCGCCCATCATCGAACGGGCAAGCCGCACGGCTGGATTCACAACGAGCTGCGGCGC
CGCTGCGGCGGACCGCCGATCGCCGCGGCCAGCCGCGAACAGTTGCGGGCCCGCATCGACGCGGTGCGCCGGCTCAACGC
CGAGCACTCCTGA

Upstream 100 bases:

>100_bases
CTGCAGGCCCCGACGGCGGCCCGTCACCGCTAGCCGGTCGAGTCGCTCCCGCACCGAAAACCGTTGGCGTGCTAGATTTC
ACAGCCGCCGCTCAATCGAG

Downstream 100 bases:

>100_bases
CGGCCCATCACGGCCGCTAGTCGCCGACCGGTTCCTCGAGCACTTCCACGGCCGGACCGCCCAGCACCGTGAGCAGGCTT
TGCTCGACGGCGCCGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MAASRSNDWGPVSVPVSSLDPRAGNDHSDRSGALRGWQRRALVKYLAGQPRDFLAVATPGSGKTTFALRVAAELLGQRAV
EQVTVVVPTEHLKVQWAQAAARHGLALDPRFSNSNPRIAPEYHGVMVTYAQVAAHPTLHRVRTEQRRTLVIFDEIHHGGD
AKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVRYEAGPDGVRRSQANHTYGYPEALADGVVRPVVFLAYSGEARWR
DSAGEEHAARLGEPLSAEQTARAWRTALDPAGEWMPAVIAAADQRLRQLRAHIPDAGGMIIASDRVAARAYATLLTKITS
ETPTVVLSDDPGSSARISEFAASTSRWLVAVRMVSEGVDVPRLSVGIYATSASTPLFFAQAVGRFVRSRRPGETASIFLP
SVPNLLQLASELEAQRNHVLGEPHRVSEGDPLDGDPATRTQNEKSELDNGFTSLGADAELDQVIFDGSSFGTAAPAGSEE
EADYLGIPGLLDAEQMRALLHQRQDEQLQRRAGQPSAGDAPPATVHGQLRELRRELNTLVSIAHHRTGKPHGWIHNELRR
RCGGPPIAAASREQLRARIDAVRRLNAEHS

Sequences:

>Translated_590_residues
MAASRSNDWGPVSVPVSSLDPRAGNDHSDRSGALRGWQRRALVKYLAGQPRDFLAVATPGSGKTTFALRVAAELLGQRAV
EQVTVVVPTEHLKVQWAQAAARHGLALDPRFSNSNPRIAPEYHGVMVTYAQVAAHPTLHRVRTEQRRTLVIFDEIHHGGD
AKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVRYEAGPDGVRRSQANHTYGYPEALADGVVRPVVFLAYSGEARWR
DSAGEEHAARLGEPLSAEQTARAWRTALDPAGEWMPAVIAAADQRLRQLRAHIPDAGGMIIASDRVAARAYATLLTKITS
ETPTVVLSDDPGSSARISEFAASTSRWLVAVRMVSEGVDVPRLSVGIYATSASTPLFFAQAVGRFVRSRRPGETASIFLP
SVPNLLQLASELEAQRNHVLGEPHRVSEGDPLDGDPATRTQNEKSELDNGFTSLGADAELDQVIFDGSSFGTAAPAGSEE
EADYLGIPGLLDAEQMRALLHQRQDEQLQRRAGQPSAGDAPPATVHGQLRELRRELNTLVSIAHHRTGKPHGWIHNELRR
RCGGPPIAAASREQLRARIDAVRRLNAEHS
>Mature_589_residues
AASRSNDWGPVSVPVSSLDPRAGNDHSDRSGALRGWQRRALVKYLAGQPRDFLAVATPGSGKTTFALRVAAELLGQRAVE
QVTVVVPTEHLKVQWAQAAARHGLALDPRFSNSNPRIAPEYHGVMVTYAQVAAHPTLHRVRTEQRRTLVIFDEIHHGGDA
KTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVRYEAGPDGVRRSQANHTYGYPEALADGVVRPVVFLAYSGEARWRD
SAGEEHAARLGEPLSAEQTARAWRTALDPAGEWMPAVIAAADQRLRQLRAHIPDAGGMIIASDRVAARAYATLLTKITSE
TPTVVLSDDPGSSARISEFAASTSRWLVAVRMVSEGVDVPRLSVGIYATSASTPLFFAQAVGRFVRSRRPGETASIFLPS
VPNLLQLASELEAQRNHVLGEPHRVSEGDPLDGDPATRTQNEKSELDNGFTSLGADAELDQVIFDGSSFGTAAPAGSEEE
ADYLGIPGLLDAEQMRALLHQRQDEQLQRRAGQPSAGDAPPATVHGQLRELRRELNTLVSIAHHRTGKPHGWIHNELRRR
CGGPPIAAASREQLRARIDAVRRLNAEHS

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1624 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 64050; Mature: 63919

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASRSNDWGPVSVPVSSLDPRAGNDHSDRSGALRGWQRRALVKYLAGQPRDFLAVATPG
CCCCCCCCCCCEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
SGKTTFALRVAAELLGQRAVEQVTVVVPTEHLKVQWAQAAARHGLALDPRFSNSNPRIAP
CCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
EYHGVMVTYAQVAAHPTLHRVRTEQRRTLVIFDEIHHGGDAKTWGDAIREAFGDATRRLA
CCCCCEEEHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEE
LTGTPFRSDDSPIPFVRYEAGPDGVRRSQANHTYGYPEALADGVVRPVVFLAYSGEARWR
EECCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCC
DSAGEEHAARLGEPLSAEQTARAWRTALDPAGEWMPAVIAAADQRLRQLRAHIPDAGGMI
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
IASDRVAARAYATLLTKITSETPTVVLSDDPGSSARISEFAASTSRWLVAVRMVSEGVDV
EECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PRLSVGIYATSASTPLFFAQAVGRFVRSRRPGETASIFLPSVPNLLQLASELEAQRNHVL
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
GEPHRVSEGDPLDGDPATRTQNEKSELDNGFTSLGADAELDQVIFDGSSFGTAAPAGSEE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCHHHHEECCCCCCCCCCCCCCC
EADYLGIPGLLDAEQMRALLHQRQDEQLQRRAGQPSAGDAPPATVHGQLRELRRELNTLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SIAHHRTGKPHGWIHNELRRRCGGPPIAAASREQLRARIDAVRRLNAEHS
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AASRSNDWGPVSVPVSSLDPRAGNDHSDRSGALRGWQRRALVKYLAGQPRDFLAVATPG
CCCCCCCCCCEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
SGKTTFALRVAAELLGQRAVEQVTVVVPTEHLKVQWAQAAARHGLALDPRFSNSNPRIAP
CCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
EYHGVMVTYAQVAAHPTLHRVRTEQRRTLVIFDEIHHGGDAKTWGDAIREAFGDATRRLA
CCCCCEEEHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEE
LTGTPFRSDDSPIPFVRYEAGPDGVRRSQANHTYGYPEALADGVVRPVVFLAYSGEARWR
EECCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCC
DSAGEEHAARLGEPLSAEQTARAWRTALDPAGEWMPAVIAAADQRLRQLRAHIPDAGGMI
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
IASDRVAARAYATLLTKITSETPTVVLSDDPGSSARISEFAASTSRWLVAVRMVSEGVDV
EECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PRLSVGIYATSASTPLFFAQAVGRFVRSRRPGETASIFLPSVPNLLQLASELEAQRNHVL
CEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
GEPHRVSEGDPLDGDPATRTQNEKSELDNGFTSLGADAELDQVIFDGSSFGTAAPAGSEE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCHHHHEECCCCCCCCCCCCCCC
EADYLGIPGLLDAEQMRALLHQRQDEQLQRRAGQPSAGDAPPATVHGQLRELRRELNTLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SIAHHRTGKPHGWIHNELRRRCGGPPIAAASREQLRARIDAVRRLNAEHS
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]