| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cdsA
Identifier: 41409042
GI number: 41409042
Start: 3279419
End: 3280354
Strand: Reverse
Name: cdsA
Synonym: MAP2944c
Alternate gene names: 41409042
Gene position: 3280354-3279419 (Counterclockwise)
Preceding gene: 41409043
Following gene: 41409041
Centisome position: 67.92
GC content: 70.62
Gene sequence:
>936_bases GTGGCTACCTCAGATCCCGGTGCAGGCGACGAGCCGGAGCATGCCGTCGAGAACACGACCGAGGGTGCGGCCGGGCAGCG GGCCAAGAAGAAAACCTCCCGGGCCGGACGTGACCTGCGGGCCGCCATCGCGGTGGGCGCCGGTATCGGCGCCGTGCTCA TCGTCACGCTGGTGTTCGCGCCCCGCTTCTGGGTGCCGATCGTCGCGATGGCCATCCTGGTCGCCAGCCACGAGGTGGTC CGCCGGCTGCGCGAGGCCGGATACGTCATCCCGGTCATTCCGTTGCTGGCCGGCGGCCAGCTCACGGTGTGGCTGACCTG GCCGTTCCACGCCGCCGGCGCGTTGGCCGGCTTCGGCGTCACCGTGGTGGCCTGCCTGTTCTGGCGGTTGTTCATGCAGG ACAACCGCAAGCGCCCCGAGCCGTTCGCCGGTTCACCCTCGGCGAACTACCTGCGCGACGCGTCGGCCACCGTCTTCCTG GCCTGCTGGGTGCCGTTGTTCGCCTCCTTCGCCGCCCTGCTGGTCTATCCCGCCGACGGTGCCGGGCGGGTGTTCTGCCT GATGATCACCGTGGTGGCCTCCGACGTCGGCGGCTACGCCGTGGGCGTGCTGTTCGGCAAGCATCCGATGGTCCCGGCGA TCAGCCCCAAGAAATCCTGGGAGGGCCTGGCCGGCTCGCTGGTGCTGGGTATCACCGCGGCCACCCTGGCGGCGACTTTT CTGGCCGGCAAGGCGCCGTGGGTGGGCGCGCTGCTGGGGGTGGTGCTGGTGTTCACCTGCACCCTCGGCGACCTGGTGGA ATCGCAGGTCAAGCGTGACCTGGGTATCAAGGACATGGGCCGGCTGCTGCCCGGCCACGGCGGCCTGATGGACCGGCTGG ACGGCGTGCTGCCGTCGGCGGTCGCCGCCTGGACGGTGCTGACGCTCGTTCCGTAG
Upstream 100 bases:
>100_bases CCCATCAGTACATCACCCAAATCGACGAGCTGGTCAAGCACAAAGAAGGCGAGCTGCTGGAGGTCTAGCGACCATCCGGC AGCGAAGTTGATTCAGGTCC
Downstream 100 bases:
>100_bases GCCGGCCCCGGCGATGACCGATACTGGACGGGTCATGGTTCAACAACTGGTGTTCTCCGAGCCGCGCCCCGGTAAGCCGC CGCGGCACCTGGCCGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVV RRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFL ACWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP
Sequences:
>Translated_311_residues MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVV RRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFL ACWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP >Mature_310_residues ATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFAPRFWVPIVAMAILVASHEVVR RLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGVTVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLA CWVPLFASFAALLVYPADGAGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATFL AGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVAAWTVLTLVP
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=146, Percent_Identity=39.041095890411, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787677, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 32493; Mature: 32361
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFA CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHC PRFWVPIVAMAILVASHEVVRRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGV CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCEEEEEEECCHHHHHHHHHHHH TVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLACWVPLFASFAALLVYPADG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC AGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH VAAWTVLTLVP HHHHHHHHCCC >Mature Secondary Structure ATSDPGAGDEPEHAVENTTEGAAGQRAKKKTSRAGRDLRAAIAVGAGIGAVLIVTLVFA CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHC PRFWVPIVAMAILVASHEVVRRLREAGYVIPVIPLLAGGQLTVWLTWPFHAAGALAGFGV CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCEEEEEEECCHHHHHHHHHHHH TVVACLFWRLFMQDNRKRPEPFAGSPSANYLRDASATVFLACWVPLFASFAALLVYPADG HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCC AGRVFCLMITVVASDVGGYAVGVLFGKHPMVPAISPKKSWEGLAGSLVLGITAATLAATF CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH LAGKAPWVGALLGVVLVFTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH VAAWTVLTLVP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]