| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409033
Identifier: 41409033
GI number: 41409033
Start: 3269273
End: 3269860
Strand: Reverse
Name: 41409033
Synonym: MAP2935c
Alternate gene names: NA
Gene position: 3269860-3269273 (Counterclockwise)
Preceding gene: 41409034
Following gene: 41409032
Centisome position: 67.7
GC content: 73.3
Gene sequence:
>588_bases GTGGGCGAGTCCGGGGAAGAGATGGTCGCGCTACGGGTCTCCGACGCCGACCGCAACGGCATCATGCGCCGGCTGCACAA CGCGGTCGCGCTGGGGCTGATCGACATCGACGAATTCGAGCAGCGCTCGTCGCAGGTCTCCTATGCGCGCACCCGCGGCG AGCTGGACGACCTGGTCGGCGACCTGCCCGGGCCGGGCGCCATCGTCACCTCCGCGGCCGACCGGGTGGAACTGCGCGGC TGGGCGGGTTCGCTCAAGCGGCACGGCGAGTGGACGGTGCCCACCCGGCTGGCGCTGGTGCGCCGGCTGGGCTCGGTGGA ACTCGACCTCACCCGCGCCCGGTTCGCCGGCCCGGTGGTGGTGATCGAACTGGACATGCGGTTCGGCTCGGTGCAGATCC GGTTGCCCGACGGCGCCAGCGCCTCCATCGACGACGTCGAGGTGTATGTGGGCAGCGCCGTCGACCGCCGCAAGGACGCG CCCGGTGAGGGCCGCCCGCACGTCGTGCTGACCGGGCGGGTGGTGTGCGGCTCGGTGGTCATCCGGGGACCCCGCCGCTC GCTGCTGCGCCGGCGGTTGAGCGGCTGA
Upstream 100 bases:
>100_bases GGTCCGGATGACCAAGGTGATGTTCGAGTCGCTGCCGCCGGACTTTTTGGCCTGACCAACACGCCCGCTCACAGGGCGCG CGCGGCGGTAAATTGCAAGC
Downstream 100 bases:
>100_bases GCCCGGTCGGGGCGCGGTTAAGCTAGCTACCATGCCCGCTCGCACCGCGCTGTCCCCCGGAGCGTTGTCGCCGACTCTGC CGGTGCCCGCCCGCATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MGESGEEMVALRVSDADRNGIMRRLHNAVALGLIDIDEFEQRSSQVSYARTRGELDDLVGDLPGPGAIVTSAADRVELRG WAGSLKRHGEWTVPTRLALVRRLGSVELDLTRARFAGPVVVIELDMRFGSVQIRLPDGASASIDDVEVYVGSAVDRRKDA PGEGRPHVVLTGRVVCGSVVIRGPRRSLLRRRLSG
Sequences:
>Translated_195_residues MGESGEEMVALRVSDADRNGIMRRLHNAVALGLIDIDEFEQRSSQVSYARTRGELDDLVGDLPGPGAIVTSAADRVELRG WAGSLKRHGEWTVPTRLALVRRLGSVELDLTRARFAGPVVVIELDMRFGSVQIRLPDGASASIDDVEVYVGSAVDRRKDA PGEGRPHVVLTGRVVCGSVVIRGPRRSLLRRRLSG >Mature_194_residues GESGEEMVALRVSDADRNGIMRRLHNAVALGLIDIDEFEQRSSQVSYARTRGELDDLVGDLPGPGAIVTSAADRVELRGW AGSLKRHGEWTVPTRLALVRRLGSVELDLTRARFAGPVVVIELDMRFGSVQIRLPDGASASIDDVEVYVGSAVDRRKDAP GEGRPHVVLTGRVVCGSVVIRGPRRSLLRRRLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21190; Mature: 21058
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESGEEMVALRVSDADRNGIMRRLHNAVALGLIDIDEFEQRSSQVSYARTRGELDDLVG CCCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHCCHHHHHC DLPGPGAIVTSAADRVELRGWAGSLKRHGEWTVPTRLALVRRLGSVELDLTRARFAGPVV CCCCCCEEEECCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCEE VIELDMRFGSVQIRLPDGASASIDDVEVYVGSAVDRRKDAPGEGRPHVVLTGRVVCGSVV EEEEECCCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCEEEEECCEEECCEE IRGPRRSLLRRRLSG EECCHHHHHHHHHCC >Mature Secondary Structure GESGEEMVALRVSDADRNGIMRRLHNAVALGLIDIDEFEQRSSQVSYARTRGELDDLVG CCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHCCHHHHHC DLPGPGAIVTSAADRVELRGWAGSLKRHGEWTVPTRLALVRRLGSVELDLTRARFAGPVV CCCCCCEEEECCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCEE VIELDMRFGSVQIRLPDGASASIDDVEVYVGSAVDRRKDAPGEGRPHVVLTGRVVCGSVV EEEEECCCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCEEEEECCEEECCEE IRGPRRSLLRRRLSG EECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA