| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409017
Identifier: 41409017
GI number: 41409017
Start: 3251350
End: 3253191
Strand: Reverse
Name: 41409017
Synonym: MAP2919c
Alternate gene names: NA
Gene position: 3253191-3251350 (Counterclockwise)
Preceding gene: 41409018
Following gene: 41409016
Centisome position: 67.36
GC content: 74.43
Gene sequence:
>1842_bases GTGAAGCCCTACCCGTTCAGCGCCATCGTCGGGCACGACCGGCTGCGGCTGGCCCTGCTGCTGTGCGCCGTGCGCCCGGA GATCGGCGGCGCGCTCATCCGCGGCGAGAAGGGCACCGCCAAGTCGACGGCCGTGCGCGGCCTGGCGGCCCTGCTGTCCG CCGCCACCGGCAGCGACGCGAACCTGGTCGAAATGCCGCTCGGCGCAACCGAAGACCGGGTGATCGGCTCGCTGGACCTG CAGCGGGTGCTGCGCGACGGCGAGCACGCGTTCTCCCCGGGGCTGCTGGCCCGCGCGCACGGCGGTGTGCTCTACGTCGA CGAGGTCAACCTGCTGCACGATCATCTCGTCGACGTGTTGCTCGACGCCGCGGCGATGGGACGGGTGCACATCGAACGCG ACGGCATCTCGCATTCGCATGACGCCCGGTTCGTGTTGATCGGCACCATGAATCCCGAAGAGGGCGAACTGCGTCCGCAG CTGCTGGACCGGTTCGGGCTCACCGTCGACGTGCATGCCTCGCGTGACGTGGAGGTGCGGGCGCAGGTGATCCGGCAGCG GATGGCCTATGAGGCCGACCCGGACGGTTTCGCCGAACGCTACGCCGACGCCGACGCCGAGCTGGCCCGGCGCATCGCCG CGGCGCGCGCCCTGGTCGACGACGTGGTGTTGCCCGACACCGAGTTACAGCGCATCGCGGCGCTGTGCGCGGCGTTCGAC GTGGACGGCATGCGGGCCGATCTGGTGGTGGCCCGCGCCGCGGTCGCGCACGCGGCCTGGCGCGGCGCGCCCACCGTCGA GGAGCAGGACATCCGGGTGGCCGCCGAGCTGGCCCTGCCGCACCGCCGCCGCCGCGATCCCTTCGACGACCCGGGCATCG ACCGCGAGCAACTGGACGAGGCCCTGGCCCAGGCCGGCTCCGAGCCCGACCCGGATCCCGACCCGCCCGGCGGAGGCCAG GCCGGCGAGACAGAACAGCAACCGCCGCAACGGGATTCGGCGCAGGACGCCAAGCCGCGGCCGCCGACGACGAAACCGAG TGCGCCGCCGTCGAAGACGTTTCGCACCCGCGCGCTGCGGGTCCCCGGTGTCGGCGAAGGGGCACCCGGCCGGCGGTCGC GGGCCCGCAACGCCAGCGGCAGCGTCATCGCAGCCACCGACGGCGCCGACACCGGCTGCGGCGGCCACGGGCTGCACCTG TTCGCCACCCTGCTCTCGGCCGCCGAACGGGCCGGTGCCGGGCCGCTGCGGCCGGGGCCCGACGATGTGCGACGGGCCGT GCGCGAGGGTCGCGAAGGCAATCTGGTGATCTTCGTCGTCGACGCCTCCGGATCGATGGCGGCGCGGGACCGGATGGCGG CGGTCAGCGGTGCCACGCTGTCGCTGCTGCGCGACGCCTATCAGCGCCGCGACAAGGTCGCCGTGATCACGTTCCGGCAA CAGCAGGCGCGGCTGCTGTTGCCGCCCACCTCCTCGGCGCACATCGCCGGGCGGCGGCTGGCCCGCTTCGACACCGGCGG CAAGACGCCGCTGGCCGAAGGGCTGCTGGCCGCGCGCGAGCTGATCGTCCGGGAGAAGGCCCGCGACCGGGCGCGCCGCG CCCTCGTGGTGGTGCTCACCGACGGCCGGGCCACCGCCGGCCCGGATCCGTTGGGCCGCAGCCGGATCGCCGCGGCCCGG CTGGTCGCCGAGGGCGCGGCCGCGGTGGTGGTGGACTGCGAAACGTCGTATGTGCGGCTGGGCCTGGCCGAACACCTGGC ACGCCAGCTGGGCGCCCCGGCGGTGCGGCTGGAGCAGTTGCATGCGGATTCGCTGACGCGTGCGGTGCGCGACGCCGCCT GA
Upstream 100 bases:
>100_bases ACGCCCAGCACGGATTCGTCCGCGACGGCGACGATTTCCTCGACGACGGCGTCCCGCACGTGCCCATGCTGCGACCCGGC TCGGGATTGGCGGAAAAGCC
Downstream 100 bases:
>100_bases GCCGGGGCGAGCAGAAAGGGTAACCGCTTATGCCACAAGGTGTTCCGCTTCAAGTTCCCGACGACGGCCTGACCACCCGG GCCCGCCGGCACACCCCGGT
Product: hypothetical protein
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MKPYPFSAIVGHDRLRLALLLCAVRPEIGGALIRGEKGTAKSTAVRGLAALLSAATGSDANLVEMPLGATEDRVIGSLDL QRVLRDGEHAFSPGLLARAHGGVLYVDEVNLLHDHLVDVLLDAAAMGRVHIERDGISHSHDARFVLIGTMNPEEGELRPQ LLDRFGLTVDVHASRDVEVRAQVIRQRMAYEADPDGFAERYADADAELARRIAAARALVDDVVLPDTELQRIAALCAAFD VDGMRADLVVARAAVAHAAWRGAPTVEEQDIRVAAELALPHRRRRDPFDDPGIDREQLDEALAQAGSEPDPDPDPPGGGQ AGETEQQPPQRDSAQDAKPRPPTTKPSAPPSKTFRTRALRVPGVGEGAPGRRSRARNASGSVIAATDGADTGCGGHGLHL FATLLSAAERAGAGPLRPGPDDVRRAVREGREGNLVIFVVDASGSMAARDRMAAVSGATLSLLRDAYQRRDKVAVITFRQ QQARLLLPPTSSAHIAGRRLARFDTGGKTPLAEGLLAARELIVREKARDRARRALVVVLTDGRATAGPDPLGRSRIAAAR LVAEGAAAVVVDCETSYVRLGLAEHLARQLGAPAVRLEQLHADSLTRAVRDAA
Sequences:
>Translated_613_residues MKPYPFSAIVGHDRLRLALLLCAVRPEIGGALIRGEKGTAKSTAVRGLAALLSAATGSDANLVEMPLGATEDRVIGSLDL QRVLRDGEHAFSPGLLARAHGGVLYVDEVNLLHDHLVDVLLDAAAMGRVHIERDGISHSHDARFVLIGTMNPEEGELRPQ LLDRFGLTVDVHASRDVEVRAQVIRQRMAYEADPDGFAERYADADAELARRIAAARALVDDVVLPDTELQRIAALCAAFD VDGMRADLVVARAAVAHAAWRGAPTVEEQDIRVAAELALPHRRRRDPFDDPGIDREQLDEALAQAGSEPDPDPDPPGGGQ AGETEQQPPQRDSAQDAKPRPPTTKPSAPPSKTFRTRALRVPGVGEGAPGRRSRARNASGSVIAATDGADTGCGGHGLHL FATLLSAAERAGAGPLRPGPDDVRRAVREGREGNLVIFVVDASGSMAARDRMAAVSGATLSLLRDAYQRRDKVAVITFRQ QQARLLLPPTSSAHIAGRRLARFDTGGKTPLAEGLLAARELIVREKARDRARRALVVVLTDGRATAGPDPLGRSRIAAAR LVAEGAAAVVVDCETSYVRLGLAEHLARQLGAPAVRLEQLHADSLTRAVRDAA >Mature_613_residues MKPYPFSAIVGHDRLRLALLLCAVRPEIGGALIRGEKGTAKSTAVRGLAALLSAATGSDANLVEMPLGATEDRVIGSLDL QRVLRDGEHAFSPGLLARAHGGVLYVDEVNLLHDHLVDVLLDAAAMGRVHIERDGISHSHDARFVLIGTMNPEEGELRPQ LLDRFGLTVDVHASRDVEVRAQVIRQRMAYEADPDGFAERYADADAELARRIAAARALVDDVVLPDTELQRIAALCAAFD VDGMRADLVVARAAVAHAAWRGAPTVEEQDIRVAAELALPHRRRRDPFDDPGIDREQLDEALAQAGSEPDPDPDPPGGGQ AGETEQQPPQRDSAQDAKPRPPTTKPSAPPSKTFRTRALRVPGVGEGAPGRRSRARNASGSVIAATDGADTGCGGHGLHL FATLLSAAERAGAGPLRPGPDDVRRAVREGREGNLVIFVVDASGSMAARDRMAAVSGATLSLLRDAYQRRDKVAVITFRQ QQARLLLPPTSSAHIAGRRLARFDTGGKTPLAEGLLAARELIVREKARDRARRALVVVLTDGRATAGPDPLGRSRIAAAR LVAEGAAAVVVDCETSYVRLGLAEHLARQLGAPAVRLEQLHADSLTRAVRDAA
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 65234; Mature: 65234
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYPFSAIVGHDRLRLALLLCAVRPEIGGALIRGEKGTAKSTAVRGLAALLSAATGSDA CCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC NLVEMPLGATEDRVIGSLDLQRVLRDGEHAFSPGLLARAHGGVLYVDEVNLLHDHLVDVL CEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEECCCCEEEEECHHHHHHHHHHHH LDAAAMGRVHIERDGISHSHDARFVLIGTMNPEEGELRPQLLDRFGLTVDVHASRDVEVR HHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCCHHHH AQVIRQRMAYEADPDGFAERYADADAELARRIAAARALVDDVVLPDTELQRIAALCAAFD HHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC VDGMRADLVVARAAVAHAAWRGAPTVEEQDIRVAAELALPHRRRRDPFDDPGIDREQLDE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHH ALAQAGSEPDPDPDPPGGGQAGETEQQPPQRDSAQDAKPRPPTTKPSAPPSKTFRTRALR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEE VPGVGEGAPGRRSRARNASGSVIAATDGADTGCGGHGLHLFATLLSAAERAGAGPLRPGP CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH DDVRRAVREGREGNLVIFVVDASGSMAARDRMAAVSGATLSLLRDAYQRRDKVAVITFRQ HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC QQARLLLPPTSSAHIAGRRLARFDTGGKTPLAEGLLAARELIVREKARDRARRALVVVLT CCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE DGRATAGPDPLGRSRIAAARLVAEGAAAVVVDCETSYVRLGLAEHLARQLGAPAVRLEQL CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH HADSLTRAVRDAA HHHHHHHHHHHCC >Mature Secondary Structure MKPYPFSAIVGHDRLRLALLLCAVRPEIGGALIRGEKGTAKSTAVRGLAALLSAATGSDA CCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC NLVEMPLGATEDRVIGSLDLQRVLRDGEHAFSPGLLARAHGGVLYVDEVNLLHDHLVDVL CEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHEECCCCEEEEECHHHHHHHHHHHH LDAAAMGRVHIERDGISHSHDARFVLIGTMNPEEGELRPQLLDRFGLTVDVHASRDVEVR HHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCCHHHH AQVIRQRMAYEADPDGFAERYADADAELARRIAAARALVDDVVLPDTELQRIAALCAAFD HHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC VDGMRADLVVARAAVAHAAWRGAPTVEEQDIRVAAELALPHRRRRDPFDDPGIDREQLDE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHH ALAQAGSEPDPDPDPPGGGQAGETEQQPPQRDSAQDAKPRPPTTKPSAPPSKTFRTRALR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEE VPGVGEGAPGRRSRARNASGSVIAATDGADTGCGGHGLHLFATLLSAAERAGAGPLRPGP CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH DDVRRAVREGREGNLVIFVVDASGSMAARDRMAAVSGATLSLLRDAYQRRDKVAVITFRQ HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC QQARLLLPPTSSAHIAGRRLARFDTGGKTPLAEGLLAARELIVREKARDRARRALVVVLT CCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE DGRATAGPDPLGRSRIAAARLVAEGAAAVVVDCETSYVRLGLAEHLARQLGAPAVRLEQL CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH HADSLTRAVRDAA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]