Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41409009

Identifier: 41409009

GI number: 41409009

Start: 3242213

End: 3242752

Strand: Direct

Name: 41409009

Synonym: MAP2911

Alternate gene names: NA

Gene position: 3242213-3242752 (Clockwise)

Preceding gene: 41409002

Following gene: 41409010

Centisome position: 67.13

GC content: 77.22

Gene sequence:

>540_bases
GTGCCTAGCGCAGTTCCGCCCGTCAACAGGCGTGTCAACAGGCGTGAGGTCCTCGCCGGTGGCGCGGCGCTGGCCGCGCT
GGGAGCGGTGTCCGCCTGCAGCAAGCCCGCGCCCAAGCCGCCGCCGGTCGAGCAGCTGCTGGGCCCGCTGGACCAGGCCC
GCCACGACAGCGCGCTGGCCGGCGCCGCCGCCGCGGCCCTGGGCAACCCGCCGCAGGTCGCCGCCGCGCTGACCGTGGTG
GCGAGCCAGCGCGCCGCGCACGCCCGCGCGTTGTCCACCGAGATCTCGCGGGCGGCCGGCAAGCTCGCCACCTCCTCGAC
CAGCGAGACGACCAGCCCGAGCCCCGCGCAACCGGCCGGGCCGCCACCACCCCCGCCGCCGGTGTCCGACGTGATCAACG
CGCTGCGCGCCTCGGCCGACAGCGCCAGCCGGCTGGTGGGCACCGAATCCGGCTACCGGGCCGGGTTGCTGGCCTCGATC
GCGGCCTCCTGCACGGCGTCCTACACCGTCGCGCTGGTGCCCGGGGGGCCGTCGATATGA

Upstream 100 bases:

>100_bases
CGCGAGAACCAGCTATCCACGATACGCCAGGAATCAGCGATGACGGGGTGATCGCGTCCTGGCATCGAGCCCGCTTTCGC
GCCGATGGCAGGATGTCCTT

Downstream 100 bases:

>100_bases
CCTCGGGCAAGGACGCCGACAACGCGGCGCTGTGCGACGCGCTGGCCATCGAGCACTCGACGATCTACGGCTACGGGATC
GTCTCGGCGATGTCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPSAVPPVNRRVNRREVLAGGAALAALGAVSACSKPAPKPPPVEQLLGPLDQARHDSALAGAAAAALGNPPQVAAALTVV
ASQRAAHARALSTEISRAAGKLATSSTSETTSPSPAQPAGPPPPPPPVSDVINALRASADSASRLVGTESGYRAGLLASI
AASCTASYTVALVPGGPSI

Sequences:

>Translated_179_residues
MPSAVPPVNRRVNRREVLAGGAALAALGAVSACSKPAPKPPPVEQLLGPLDQARHDSALAGAAAAALGNPPQVAAALTVV
ASQRAAHARALSTEISRAAGKLATSSTSETTSPSPAQPAGPPPPPPPVSDVINALRASADSASRLVGTESGYRAGLLASI
AASCTASYTVALVPGGPSI
>Mature_178_residues
PSAVPPVNRRVNRREVLAGGAALAALGAVSACSKPAPKPPPVEQLLGPLDQARHDSALAGAAAAALGNPPQVAAALTVVA
SQRAAHARALSTEISRAAGKLATSSTSETTSPSPAQPAGPPPPPPPVSDVINALRASADSASRLVGTESGYRAGLLASIA
ASCTASYTVALVPGGPSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17470; Mature: 17339

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAVPPVNRRVNRREVLAGGAALAALGAVSACSKPAPKPPPVEQLLGPLDQARHDSALA
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GAAAAALGNPPQVAAALTVVASQRAAHARALSTEISRAAGKLATSSTSETTSPSPAQPAG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPPPPPPVSDVINALRASADSASRLVGTESGYRAGLLASIAASCTASYTVALVPGGPSI
CCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
>Mature Secondary Structure 
PSAVPPVNRRVNRREVLAGGAALAALGAVSACSKPAPKPPPVEQLLGPLDQARHDSALA
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GAAAAALGNPPQVAAALTVVASQRAAHARALSTEISRAAGKLATSSTSETTSPSPAQPAG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPPPPPPVSDVINALRASADSASRLVGTESGYRAGLLASIAASCTASYTVALVPGGPSI
CCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA