Click here to switch to the map view.

The map label for this gene is rimP [H]

Identifier: 41409008

GI number: 41409008

Start: 3241460

End: 3241996

Strand: Reverse

Name: rimP [H]

Synonym: MAP2910c

Alternate gene names: 41409008

Gene position: 3241996-3241460 (Counterclockwise)

Preceding gene: 41409011

Following gene: 41409007

Centisome position: 67.13

GC content: 68.72

Gene sequence:

>537_bases
GTGACCACCGGGCTACCGTCCCAGACGCAGGTGATCGAGCTACTCGGTGGAGAGTTTGCGCGCGCCGGATACGAGATCGA
AGACGTGGTCATCGACGCACACGCGCGTCCACCGCGCATCACGGTGATCGCCGACGGCGACGACGGCCTCGACCTCGACG
CCGCGGCCACGTTGTCCCGCTCGGCGTCGGCGCTGCTGGACAAGCTCGACACCATCGAGGACCACTACGTGCTCGAGGTG
TCCTCGCCCGGGGTGGACCGACCGCTGAGAACCCCCAAGCATTTTCGCCGCGCCCGCGGCCGCAAGGTCGACGTCGTCCT
GTCGGACAACTCGACGGTGACCGGCCGGGTCGGCGAGACGGGCGACGACACCATCGCCCTGGTGGTCCGCGCCGGCCGGG
ACTGGGCGATACGCGAGATTCCGCTCGGTGACGTCGTCAAAGCCGTTGTCCAGGTGGAGTTTTCGCCCCCTGCGCAGGCG
GAGCTGGAACTGGCGGGTGTGGGCGGCACGGACAAGACGGAGGAGCGGCGCAAATGA

Upstream 100 bases:

>100_bases
GGGCTGTGTGCTCCGCCGGGACACCGGAAGCCGCCCGCGAGGCCATCGGGGTGGCGAACATCCGCCAGATGACCGGACAA
CTCAAGATGAGGAGCTCGCC

Downstream 100 bases:

>100_bases
ATCGCGCCGGCGACGATGCAGAGCGGAGCGATGAGGAGGAGCGGCGCAAATGAATATCGACATGGCCGCACTGCACGCGA
TCGAGGTGGATCGGGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTTGLPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDKLDTIEDHYVLEV
SSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDTIALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQA
ELELAGVGGTDKTEERRK

Sequences:

>Translated_178_residues
MTTGLPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDKLDTIEDHYVLEV
SSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDTIALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQA
ELELAGVGGTDKTEERRK
>Mature_177_residues
TTGLPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDKLDTIEDHYVLEVS
SPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDTIALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQAE
LELAGVGGTDKTEERRK

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=102, Percent_Identity=38.2352941176471, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19136; Mature: 19004

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGLPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSR
CCCCCCCHHHHHHHHCCHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHH
SASALLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGET
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEECCCC
GDDTIALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQAELELAGVGGTDKTEERRK
CCCEEEEEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCHHHCC
>Mature Secondary Structure 
TTGLPSQTQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSR
CCCCCCHHHHHHHHCCHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHH
SASALLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGET
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEECCCC
GDDTIALVVRAGRDWAIREIPLGDVVKAVVQVEFSPPAQAELELAGVGGTDKTEERRK
CCCEEEEEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA