| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is cocE [H]
Identifier: 41409000
GI number: 41409000
Start: 3231600
End: 3233327
Strand: Direct
Name: cocE [H]
Synonym: MAP2902
Alternate gene names: 41409000
Gene position: 3231600-3233327 (Clockwise)
Preceding gene: 41408999
Following gene: 41409002
Centisome position: 66.91
GC content: 73.21
Gene sequence:
>1728_bases GTGAGTCTGACTTCACTTCGCCCGGCGCAGCCGGCGCTGCACACGCTGCGACACCTCGGCGGCAGGGCCGCCGGCCGGCT GCTGGGCCTGCCTCCGGCCACCACCGACTACACCGTGCGGCGGGTCGCGGTGCCGATGCGCGACGGCGTCGAGCTGGTGG CCGACCACTACGCGCCCGCCACCTCCGCGCCGGCCGGCACCCTGCTGGTGCGCGCCCCCTACGGACGCGGGTTTCCGTTC GCGCTGGTGTTCGGCGGGTTGTACGCCGCGCGCGGCTATCACGTTGTGCTGCAAAGCGTGCGCGGAACGTTCGGCTCGGG CGGGGTGTTCGAGCCGATGGCCCACGAGGTCGCCGACGGCGCCGACACCGTGGCATGGCTGCGCGAACAGCCCTGGTTCA CCGGCCGCTTCGCCACCATCGGAATGTCCTATCTGGGGTTCACCCAGTGGGCGCTGCTGCAGGACCCGCCGCCGGACATG GCCACCGCCGTCATCATGGTCGGTCCGCACGACTTCAACGAATCAACTTGGGGCACCGGGTCGTTCGCCGTGAACGACTT CCTCGGCTGGAGCGACATGGTGTCGCACCAGGAGGACCCGGTGCGCGCCCGGGCCGCGCTGCACCAGCTGCGGGCCCGCC GCAAGGTGGCCGAAGCGGCGGCCGGGGTGCCGCTCGGCGAGGCCGCCCGGGCGCTGCTGGGCACCGGCGCGCCCTGGTTC GAATCCTGGATCGAACACGCCGACCCGTCCGATCCGTTCTGGAACTCGTTGCGGTGCAATGAAGCCCTGGACCGGGTGCG GGTGCCGGTGCTGTTGGTGGGCGGCTGGCAGGACCTCTTCATCCGCCAAACCCTGCAGCAGTACGCGCACTTGCGCGCCC GCGGCGTCGACGTCGCGCTCACCGTCGGCCCGTGGACCCACACCCAGCTGCTCACCAGCGGGCTGGGCGTCTGCACCCGG GAGTCGCTGCAGTGGCTGGACACCCACCTGGGTGACGCGCCCGGCCGGCGGGCGGGCCGGGTGCACGTCTACGTCACCGG CGTGGACCGGTCCCGGGCCTGGCGCCGCCTACCGGACTGGCCCCCGGCCACCACCGAGCGCGCGCTGTACCTGCGCCCCG GCGGCTACCTGGGCGAGACGGCGCCGAGCCTGAAAGGGTTGGCGCCGGCCACCTTTCGTTACGACCCGGCCCACCCGACG CCGACCACCGGCGGTCCGTTGCTGTCCCCCAACGGCGGTTACCGCGACGACACCCGGCTGGCGTCCCGCGACGACGTGCT GGCGTTCACCAGCGCCACCCTCACCGAGGACGTGTACGTGTACGGCAACCCGGTCGTCGAGCTCGCCCACGGCGCCGACC ATCCGCACGCGGATCTGTTCGTGCGGGTGAGCGAGGTCGACGCAGCGGGCCGGTCGCGCAACGTCACCGAGACCTACCGG CGGCTCAGCGCCGCGGCAAAACCTCAGGCCGACAAGGTCATTCGCCTCGAACTGGACGGCACGGCCCACCGCTTCCGGGC CGGCTCGCGCATCCGGCTGCTGATCGCCGGCAGCTGGTCGCCGCGCTACGCCCATAATCTGGGCTCGGGCGAACCGGTGC TGACCGCCCGGCGGCTCACCCCGGTCACCCACAGCGTGCGTTACGGGCGCTCCCGGCTGCTGCTGCCCGTCGGGCCGGCC GAGCCGTCAGCCGACGGCGTCGCGGACCCGGTCGGCGACGGCGGCTAG
Upstream 100 bases:
>100_bases GTTGTACTACTCGACCGTTTACTCCAATCCCGAGGTCGACTGCATGCAAACCAATCTGCAGCGCGCCAACGACCTGGCCC CCTACTACAAGTTCTAGGCC
Downstream 100 bases:
>100_bases CGTTTCGTCATCGTGAATCGGCGGCCCCAGCCGAGCGTGCACCGGCAGCTGCACCCAGCTCTTGCAGCCGGCGTAGTCCG GCGTGCGGGCCAGCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSLTSLRPAQPALHTLRHLGGRAAGRLLGLPPATTDYTVRRVAVPMRDGVELVADHYAPATSAPAGTLLVRAPYGRGFPF ALVFGGLYAARGYHVVLQSVRGTFGSGGVFEPMAHEVADGADTVAWLREQPWFTGRFATIGMSYLGFTQWALLQDPPPDM ATAVIMVGPHDFNESTWGTGSFAVNDFLGWSDMVSHQEDPVRARAALHQLRARRKVAEAAAGVPLGEAARALLGTGAPWF ESWIEHADPSDPFWNSLRCNEALDRVRVPVLLVGGWQDLFIRQTLQQYAHLRARGVDVALTVGPWTHTQLLTSGLGVCTR ESLQWLDTHLGDAPGRRAGRVHVYVTGVDRSRAWRRLPDWPPATTERALYLRPGGYLGETAPSLKGLAPATFRYDPAHPT PTTGGPLLSPNGGYRDDTRLASRDDVLAFTSATLTEDVYVYGNPVVELAHGADHPHADLFVRVSEVDAAGRSRNVTETYR RLSAAAKPQADKVIRLELDGTAHRFRAGSRIRLLIAGSWSPRYAHNLGSGEPVLTARRLTPVTHSVRYGRSRLLLPVGPA EPSADGVADPVGDGG
Sequences:
>Translated_575_residues MSLTSLRPAQPALHTLRHLGGRAAGRLLGLPPATTDYTVRRVAVPMRDGVELVADHYAPATSAPAGTLLVRAPYGRGFPF ALVFGGLYAARGYHVVLQSVRGTFGSGGVFEPMAHEVADGADTVAWLREQPWFTGRFATIGMSYLGFTQWALLQDPPPDM ATAVIMVGPHDFNESTWGTGSFAVNDFLGWSDMVSHQEDPVRARAALHQLRARRKVAEAAAGVPLGEAARALLGTGAPWF ESWIEHADPSDPFWNSLRCNEALDRVRVPVLLVGGWQDLFIRQTLQQYAHLRARGVDVALTVGPWTHTQLLTSGLGVCTR ESLQWLDTHLGDAPGRRAGRVHVYVTGVDRSRAWRRLPDWPPATTERALYLRPGGYLGETAPSLKGLAPATFRYDPAHPT PTTGGPLLSPNGGYRDDTRLASRDDVLAFTSATLTEDVYVYGNPVVELAHGADHPHADLFVRVSEVDAAGRSRNVTETYR RLSAAAKPQADKVIRLELDGTAHRFRAGSRIRLLIAGSWSPRYAHNLGSGEPVLTARRLTPVTHSVRYGRSRLLLPVGPA EPSADGVADPVGDGG >Mature_574_residues SLTSLRPAQPALHTLRHLGGRAAGRLLGLPPATTDYTVRRVAVPMRDGVELVADHYAPATSAPAGTLLVRAPYGRGFPFA LVFGGLYAARGYHVVLQSVRGTFGSGGVFEPMAHEVADGADTVAWLREQPWFTGRFATIGMSYLGFTQWALLQDPPPDMA TAVIMVGPHDFNESTWGTGSFAVNDFLGWSDMVSHQEDPVRARAALHQLRARRKVAEAAAGVPLGEAARALLGTGAPWFE SWIEHADPSDPFWNSLRCNEALDRVRVPVLLVGGWQDLFIRQTLQQYAHLRARGVDVALTVGPWTHTQLLTSGLGVCTRE SLQWLDTHLGDAPGRRAGRVHVYVTGVDRSRAWRRLPDWPPATTERALYLRPGGYLGETAPSLKGLAPATFRYDPAHPTP TTGGPLLSPNGGYRDDTRLASRDDVLAFTSATLTEDVYVYGNPVVELAHGADHPHADLFVRVSEVDAAGRSRNVTETYRR LSAAAKPQADKVIRLELDGTAHRFRAGSRIRLLIAGSWSPRYAHNLGSGEPVLTARRLTPVTHSVRYGRSRLLLPVGPAE PSADGVADPVGDGG
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 62289; Mature: 62158
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSLRPAQPALHTLRHLGGRAAGRLLGLPPATTDYTVRRVAVPMRDGVELVADHYAPA CCCCCCCCCCHHHHHHHHHCCHHHCCEECCCCCCCCCEEEEEECCCCCCHHHHHHCCCCC TSAPAGTLLVRAPYGRGFPFALVFGGLYAARGYHVVLQSVRGTFGSGGVFEPMAHEVADG CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHCCC ADTVAWLREQPWFTGRFATIGMSYLGFTQWALLQDPPPDMATAVIMVGPHDFNESTWGTG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCCC SFAVNDFLGWSDMVSHQEDPVRARAALHQLRARRKVAEAAAGVPLGEAARALLGTGAPWF CEEHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH ESWIEHADPSDPFWNSLRCNEALDRVRVPVLLVGGWQDLFIRQTLQQYAHLRARGVDVAL HHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEE TVGPWTHTQLLTSGLGVCTRESLQWLDTHLGDAPGRRAGRVHVYVTGVDRSRAWRRLPDW EECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHCCCCC PPATTERALYLRPGGYLGETAPSLKGLAPATFRYDPAHPTPTTGGPLLSPNGGYRDDTRL CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC ASRDDVLAFTSATLTEDVYVYGNPVVELAHGADHPHADLFVRVSEVDAAGRSRNVTETYR CCCCCEEEEECCHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHH RLSAAAKPQADKVIRLELDGTAHRFRAGSRIRLLIAGSWSPRYAHNLGSGEPVLTARRLT HHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCEEEEHHCC PVTHSVRYGRSRLLLPVGPAEPSADGVADPVGDGG CHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLTSLRPAQPALHTLRHLGGRAAGRLLGLPPATTDYTVRRVAVPMRDGVELVADHYAPA CCCCCCCCCHHHHHHHHHCCHHHCCEECCCCCCCCCEEEEEECCCCCCHHHHHHCCCCC TSAPAGTLLVRAPYGRGFPFALVFGGLYAARGYHVVLQSVRGTFGSGGVFEPMAHEVADG CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHCCC ADTVAWLREQPWFTGRFATIGMSYLGFTQWALLQDPPPDMATAVIMVGPHDFNESTWGTG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCCC SFAVNDFLGWSDMVSHQEDPVRARAALHQLRARRKVAEAAAGVPLGEAARALLGTGAPWF CEEHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH ESWIEHADPSDPFWNSLRCNEALDRVRVPVLLVGGWQDLFIRQTLQQYAHLRARGVDVAL HHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEE TVGPWTHTQLLTSGLGVCTRESLQWLDTHLGDAPGRRAGRVHVYVTGVDRSRAWRRLPDW EECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHCCCCC PPATTERALYLRPGGYLGETAPSLKGLAPATFRYDPAHPTPTTGGPLLSPNGGYRDDTRL CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC ASRDDVLAFTSATLTEDVYVYGNPVVELAHGADHPHADLFVRVSEVDAAGRSRNVTETYR CCCCCEEEEECCHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHH RLSAAAKPQADKVIRLELDGTAHRFRAGSRIRLLIAGSWSPRYAHNLGSGEPVLTARRLT HHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCEEEEHHCC PVTHSVRYGRSRLLLPVGPAEPSADGVADPVGDGG CHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]