| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408998
Identifier: 41408998
GI number: 41408998
Start: 3229911
End: 3230900
Strand: Reverse
Name: 41408998
Synonym: MAP2900c
Alternate gene names: NA
Gene position: 3230900-3229911 (Counterclockwise)
Preceding gene: 41409001
Following gene: 41408997
Centisome position: 66.9
GC content: 67.88
Gene sequence:
>990_bases GTGGAGTCGTTAGGGTGGGGAGTCGTGGCAGGCCAGGAATCGAGCAACGCGGGACAACCGACGCTGTGGGCGGTGTCCGA CCTGCACACCGGGCATCTGGGCAACAAGCCGGTCACGGAGTCGCTGCACCCGTCGTCGCCGGAGGACTGGCTGATCGTCG CCGGCGACGTCGCCGAACGCACCGACGACATCCGCTGGGCCCTTGACCTGCTGCGACGGCGGTTCGCCAAGGTGATCTGG GTGCCGGGCAACCACGAGCTGTGGACCACGACCCGCGACCCGGTACAGATCTTCGGCAAGGCCCGCTACGACTATCTGGT CAACATGTGCGACGAGATGGGCGTCATCACGCCCGAGCATCCGTTCCCGGTGTGGACCGAGCGCGGCGGCCCGGCCACCA TCGTGCCGATGTTCCTGCTCTACGACTACAGCTTCTTGCCGGACGGTGCCGCAAGCAAGGCCGAGGGCCTGATGATCGCG CGGGACCGCAACGTGGTGGCCACCGACGAGTTCCTGCTCTCCCCGGAGCCCTATCCGACCCGGGAGGCGTGGTGCCGGGA ACGGCTGGAGATCACCCGCGCCCGGCTGGAGGCGCTGGATTGGATGACGCCGACCGTGCTGGTCAACCACTTCCCGCTGG TACGCGAGCCGTGCGACGCGTTGTTCTACCCGGAGTTCTCGCTGTGGTGCGGCACCACCAAGACCGCCGACTGGCACACC CGCTACAACGCGGTGTGCTCGGTCTACGGCCACCTGCACATCCCGCGCACCACCTGGTATGACGACGTGCGGTTCGAGGA GGTGTCGGTGGGCTATCCGCGGGAGTGGCGGCGCCGCAAGCCCTACGGCTGGCTGCGCCAGGTGCTGCCGGATCCCCAGT ACGCGCCGGGCTACCTCAACGACTTCGGCGGTCACTTCGAGATCACTCCCGAGATGCGCCGGCAGGCCACGCAGTTCCGG GAACGGTTGCGGCAGCGGCAGTCACGATGA
Upstream 100 bases:
>100_bases CCCCTGACGCCTCAGCGGTTCCTTGCCGGGAGTGTACAAGTCGGGTGCGCGGCGTCACAGCCCGACAAGAACTTGTTCCA ATCGGAGCGGGGATGGCGCG
Downstream 100 bases:
>100_bases CGGGCACGCTGGTCTCCTCGGTGCTGCCCGCATCGGACGCCCTGGCCTACTCGGAGGTGTACTCCGATCCGCCGGGGTTG GCCCCGCTGCCCGAGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase; SimX4-Like Protein; Ser/Thr Protein Phosphatase; Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase Family Protein; Phosphohydrolase; Calcineurin-Like Phosphoesterase; Metallo-Phosphos-Hydrolase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MESLGWGVVAGQESSNAGQPTLWAVSDLHTGHLGNKPVTESLHPSSPEDWLIVAGDVAERTDDIRWALDLLRRRFAKVIW VPGNHELWTTTRDPVQIFGKARYDYLVNMCDEMGVITPEHPFPVWTERGGPATIVPMFLLYDYSFLPDGAASKAEGLMIA RDRNVVATDEFLLSPEPYPTREAWCRERLEITRARLEALDWMTPTVLVNHFPLVREPCDALFYPEFSLWCGTTKTADWHT RYNAVCSVYGHLHIPRTTWYDDVRFEEVSVGYPREWRRRKPYGWLRQVLPDPQYAPGYLNDFGGHFEITPEMRRQATQFR ERLRQRQSR
Sequences:
>Translated_329_residues MESLGWGVVAGQESSNAGQPTLWAVSDLHTGHLGNKPVTESLHPSSPEDWLIVAGDVAERTDDIRWALDLLRRRFAKVIW VPGNHELWTTTRDPVQIFGKARYDYLVNMCDEMGVITPEHPFPVWTERGGPATIVPMFLLYDYSFLPDGAASKAEGLMIA RDRNVVATDEFLLSPEPYPTREAWCRERLEITRARLEALDWMTPTVLVNHFPLVREPCDALFYPEFSLWCGTTKTADWHT RYNAVCSVYGHLHIPRTTWYDDVRFEEVSVGYPREWRRRKPYGWLRQVLPDPQYAPGYLNDFGGHFEITPEMRRQATQFR ERLRQRQSR >Mature_329_residues MESLGWGVVAGQESSNAGQPTLWAVSDLHTGHLGNKPVTESLHPSSPEDWLIVAGDVAERTDDIRWALDLLRRRFAKVIW VPGNHELWTTTRDPVQIFGKARYDYLVNMCDEMGVITPEHPFPVWTERGGPATIVPMFLLYDYSFLPDGAASKAEGLMIA RDRNVVATDEFLLSPEPYPTREAWCRERLEITRARLEALDWMTPTVLVNHFPLVREPCDALFYPEFSLWCGTTKTADWHT RYNAVCSVYGHLHIPRTTWYDDVRFEEVSVGYPREWRRRKPYGWLRQVLPDPQYAPGYLNDFGGHFEITPEMRRQATQFR ERLRQRQSR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38167; Mature: 38167
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLGWGVVAGQESSNAGQPTLWAVSDLHTGHLGNKPVTESLHPSSPEDWLIVAGDVAER CCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH TDDIRWALDLLRRRFAKVIWVPGNHELWTTTRDPVQIFGKARYDYLVNMCDEMGVITPEH HHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PFPVWTERGGPATIVPMFLLYDYSFLPDGAASKAEGLMIARDRNVVATDEFLLSPEPYPT CCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEECCCEEECCCCCCC REAWCRERLEITRARLEALDWMTPTVLVNHFPLVREPCDALFYPEFSLWCGTTKTADWHT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHCCHHHHCCCCEEEEECCCCCCCHHH RYNAVCSVYGHLHIPRTTWYDDVRFEEVSVGYPREWRRRKPYGWLRQVLPDPQYAPGYLN HHHHHHHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHCCCCCCCCCCHH DFGGHFEITPEMRRQATQFRERLRQRQSR HCCCCEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESLGWGVVAGQESSNAGQPTLWAVSDLHTGHLGNKPVTESLHPSSPEDWLIVAGDVAER CCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH TDDIRWALDLLRRRFAKVIWVPGNHELWTTTRDPVQIFGKARYDYLVNMCDEMGVITPEH HHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PFPVWTERGGPATIVPMFLLYDYSFLPDGAASKAEGLMIARDRNVVATDEFLLSPEPYPT CCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEECCCEEECCCCCCC REAWCRERLEITRARLEALDWMTPTVLVNHFPLVREPCDALFYPEFSLWCGTTKTADWHT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHCCHHHHCCCCEEEEECCCCCCCHHH RYNAVCSVYGHLHIPRTTWYDDVRFEEVSVGYPREWRRRKPYGWLRQVLPDPQYAPGYLN HHHHHHHHHHCEECCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHCCCCCCCCCCHH DFGGHFEITPEMRRQATQFRERLRQRQSR HCCCCEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA