| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408951
Identifier: 41408951
GI number: 41408951
Start: 3181381
End: 3181806
Strand: Reverse
Name: 41408951
Synonym: MAP2853c
Alternate gene names: NA
Gene position: 3181806-3181381 (Counterclockwise)
Preceding gene: 41408952
Following gene: 41408949
Centisome position: 65.88
GC content: 68.78
Gene sequence:
>426_bases GTGGATGTGGGCGTCGCGCTGCCGGGAGACCTCGTCGACCAGCTCGGGGTCCAGATCGTGCACGGCCAGCATGTGCCGGC GCCACACCTTGTTGAGCGCGTGCGAAAAGTACACGAACGGAATGAGAATCGGCAGCGTCATGCTCAGGTGAACGTCGAGC GTCGTCGGGATCAACCAGAACGGGGCCAGCACCAGCACCGCCGGCACCGCCACCCGCCGCATCATCCGGGCCGTCGCGCC CTTGCCGGCCAGGTCGTTGCGCACCCAGTCGCGCATCGAGTCCGGCAGCCGCCCGCCGCAGCAATAGCGGACGAACTGAA CGAAATTGGGCCGGGTGCGGCCCCTGTCCTGGCTCATGGCGCGCTCAGAACGTGGCTTTCAGCGACGGCAGCAGCAGCGC GGCCACCCCGCGCGCCGTGGCCTTGA
Upstream 100 bases:
>100_bases ACCGGCTGAACGGGTGGGCGCAGGCCTTCGACGAACTCGGCGGGTTACGCGGCGCCGGTTAGTCTTCCGGGCGCGGGCCG TAGCGATCGATGTAGGAGCG
Downstream 100 bases:
>100_bases GCATGTCGAAGAAGTCGAAGTAGTCCCGCCACAACGTGATTCGCCCGTTCTGCACCTCGAACACGCCGCACACCCAGAAC TGCAGCCGCAGCGGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MDVGVALPGDLVDQLGVQIVHGQHVPAPHLVERVRKVHERNENRQRHAQVNVERRRDQPERGQHQHRRHRHPPHHPGRRA LAGQVVAHPVAHRVRQPPAAAIADELNEIGPGAAPVLAHGALRTWLSATAAAARPPRAPWP
Sequences:
>Translated_141_residues MDVGVALPGDLVDQLGVQIVHGQHVPAPHLVERVRKVHERNENRQRHAQVNVERRRDQPERGQHQHRRHRHPPHHPGRRA LAGQVVAHPVAHRVRQPPAAAIADELNEIGPGAAPVLAHGALRTWLSATAAAARPPRAPWP >Mature_141_residues MDVGVALPGDLVDQLGVQIVHGQHVPAPHLVERVRKVHERNENRQRHAQVNVERRRDQPERGQHQHRRHRHPPHHPGRRA LAGQVVAHPVAHRVRQPPAAAIADELNEIGPGAAPVLAHGALRTWLSATAAAARPPRAPWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15605; Mature: 15605
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVGVALPGDLVDQLGVQIVHGQHVPAPHLVERVRKVHERNENRQRHAQVNVERRRDQPE CCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC RGQHQHRRHRHPPHHPGRRALAGQVVAHPVAHRVRQPPAAAIADELNEIGPGAAPVLAHG CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH ALRTWLSATAAAARPPRAPWP HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDVGVALPGDLVDQLGVQIVHGQHVPAPHLVERVRKVHERNENRQRHAQVNVERRRDQPE CCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC RGQHQHRRHRHPPHHPGRRALAGQVVAHPVAHRVRQPPAAAIADELNEIGPGAAPVLAHG CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH ALRTWLSATAAAARPPRAPWP HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA