| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408950
Identifier: 41408950
GI number: 41408950
Start: 3181011
End: 3181442
Strand: Direct
Name: 41408950
Synonym: MAP2852
Alternate gene names: NA
Gene position: 3181011-3181442 (Clockwise)
Preceding gene: 41408947
Following gene: 41408956
Centisome position: 65.86
GC content: 67.13
Gene sequence:
>432_bases ATGACCGAGCTGACTGGGACCACCGTTGCGAACACCCGTACGGTCGAAGGATTCCTCAACGCGCTGCAGGACGCGGATTA CGACGCCGCCGAGGCCGCACTGGCCGACGACCTCGTCTACGAGAACGTCGGGCTGCCCACCATCCACGGCCGGGCCCGGG CCATGAAGCTGTTTCGCCGGATGGAGGACCGCGCCGCCTTCGAGGTGAAGATCCACCGCATCGCGGCCGACGGCGGCGCG GTGCTCACCGAACGCACCGATGCGCTGATCTTCGGCCCGCTGCGGCTGCAGTTCTGGGTGTGCGGCGTGTTCGAGGTGCA GAACGGGCGAATCACGTTGTGGCGGGACTACTTCGACTTCTTCGACATGCTCAAGGCCACGGCGCGCGGGGTGGCCGCGC TGCTGCTGCCGTCGCTGAAAGCCACGTTCTGA
Upstream 100 bases:
>100_bases CGGGAACGAATGCCCGGGATCCGGCCCGGCGACCACGGCGACGCGCATCGGATTCACCCTGCCACAGCGTTCGGCCGCCA CGCTCGCCTACGCTGGCGAT
Downstream 100 bases:
>100_bases GCGCGCCATGAGCCAGGACAGGGGCCGCACCCGGCCCAATTTCGTTCAGTTCGTCCGCTATTGCTGCGGCGGGCGGCTGC CGGACTCGATGCGCGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Limonene-12-Epoxide Hydrolase; Epoxide Hydrolase; Limonene 1 2-Epoxide Hydrolase
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTELTGTTVANTRTVEGFLNALQDADYDAAEAALADDLVYENVGLPTIHGRARAMKLFRRMEDRAAFEVKIHRIAADGGA VLTERTDALIFGPLRLQFWVCGVFEVQNGRITLWRDYFDFFDMLKATARGVAALLLPSLKATF
Sequences:
>Translated_143_residues MTELTGTTVANTRTVEGFLNALQDADYDAAEAALADDLVYENVGLPTIHGRARAMKLFRRMEDRAAFEVKIHRIAADGGA VLTERTDALIFGPLRLQFWVCGVFEVQNGRITLWRDYFDFFDMLKATARGVAALLLPSLKATF >Mature_142_residues TELTGTTVANTRTVEGFLNALQDADYDAAEAALADDLVYENVGLPTIHGRARAMKLFRRMEDRAAFEVKIHRIAADGGAV LTERTDALIFGPLRLQFWVCGVFEVQNGRITLWRDYFDFFDMLKATARGVAALLLPSLKATF
Specific function: Unknown
COG id: COG4308
COG function: function code Q; Limonene-1,2-epoxide hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15916; Mature: 15785
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTGTTVANTRTVEGFLNALQDADYDAAEAALADDLVYENVGLPTIHGRARAMKLFRR CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MEDRAAFEVKIHRIAADGGAVLTERTDALIFGPLRLQFWVCGVFEVQNGRITLWRDYFDF HHHCCEEEEEEEEEECCCCEEEEECCCEEEECHHEEEEEEEEEEEECCCCEEEEHHHHHH FDMLKATARGVAALLLPSLKATF HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TELTGTTVANTRTVEGFLNALQDADYDAAEAALADDLVYENVGLPTIHGRARAMKLFRR CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MEDRAAFEVKIHRIAADGGAVLTERTDALIFGPLRLQFWVCGVFEVQNGRITLWRDYFDF HHHCCEEEEEEEEEECCCCEEEEECCCEEEECHHEEEEEEEEEEEECCCCEEEEHHHHHH FDMLKATARGVAALLLPSLKATF HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA