| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408928
Identifier: 41408928
GI number: 41408928
Start: 3157709
End: 3158545
Strand: Reverse
Name: 41408928
Synonym: MAP2830c
Alternate gene names: NA
Gene position: 3158545-3157709 (Counterclockwise)
Preceding gene: 41408931
Following gene: 41408926
Centisome position: 65.4
GC content: 73.48
Gene sequence:
>837_bases ATGATGAAGGCGATGCGCGTACCGATCCTGATGCTCTGCTCGGTGGTGGGGGTGGCGGCGTCGCTGACGTCGTGCCACCG GCCCGTCGAGCACGTGTCGGGTGCCCCGGTGTCCGCACCGCGGGTCGGCGGCCCGGTGCAGCGGCTCAGCCAGCCCGAGC AGAAGGCCGTCGCGGGCCCGGTGGAACCGGACCGGCGCATCGGGGCGATCTTCATCGACGGTGGGCCGCTTCATGTTTGC ACCGGTTCGGTGCTGCATTCGGTGGCCGGCAACCTGATCATCACCGCCGCGCACTGCCTGGCCGGGGCGTCGCTGATCAC GTTTGTTCCCGGCTTCGCCGGCGATGCCGCGCCCGGGCCCGCCGATGTGTGGAAGGCCGACGCGGTGTACCTCGATCCGC GCTGGACCAACGGCAAGGACCCGCACGCCGATTACGCGGTGGCCCGGGTCAGCAACGACAGCGGCGCCGCCGTCGAGTCC CGGGTGGGGTTGGCGCTGACGCTGGGCGTCACACCCCCGCCGGGCAGCCGGGTCACCGTGCTGGGCTATCCGGCCGGCGT GGGCGGCTCGCCGATCGGGTGCCAGGCCGCCACGTCGGTCACCGACACCGGATTCCCGGCGCTGGCCTGCGAGGGGCTGG TGGACGGCACCAGCGGGGCGCCCTGGGTCAGCGGCACCACCGTGGTCGGGTTGATCGGCGGCCTGGAGCGGGGCGGCTGC GCGGCCAACATGTCGTACTCGGCGCCGTTCGACGCGCAGACCGCGGAGTTGCTGGCCCGCGCCGAGGCCGGCGGACCGGG CGACCCGATCCCCAACGACCTGCAGGACGCCTGCTAG
Upstream 100 bases:
>100_bases ATCCGCGGCGCCCCGATCCGGGGTCCGCACCGCGGCGCGCCAGCAAACCCGTGGCCACACCGCGACGCGCGGAAGTCGGC CCGGCGGGGCAGGGTCAGGC
Downstream 100 bases:
>100_bases CAGATCAGCGGCGGAACTGGTTGAGCGCGCGCACCTTGTTCATCACGTCCAGCGCCGCCACCTTGTAGGCCTCGGAAAAA GTGGGGTAGTTGAACACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MMKAMRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPDRRIGAIFIDGGPLHVC TGSVLHSVAGNLIITAAHCLAGASLITFVPGFAGDAAPGPADVWKADAVYLDPRWTNGKDPHADYAVARVSNDSGAAVES RVGLALTLGVTPPPGSRVTVLGYPAGVGGSPIGCQAATSVTDTGFPALACEGLVDGTSGAPWVSGTTVVGLIGGLERGGC AANMSYSAPFDAQTAELLARAEAGGPGDPIPNDLQDAC
Sequences:
>Translated_278_residues MMKAMRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPDRRIGAIFIDGGPLHVC TGSVLHSVAGNLIITAAHCLAGASLITFVPGFAGDAAPGPADVWKADAVYLDPRWTNGKDPHADYAVARVSNDSGAAVES RVGLALTLGVTPPPGSRVTVLGYPAGVGGSPIGCQAATSVTDTGFPALACEGLVDGTSGAPWVSGTTVVGLIGGLERGGC AANMSYSAPFDAQTAELLARAEAGGPGDPIPNDLQDAC >Mature_278_residues MMKAMRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGPVEPDRRIGAIFIDGGPLHVC TGSVLHSVAGNLIITAAHCLAGASLITFVPGFAGDAAPGPADVWKADAVYLDPRWTNGKDPHADYAVARVSNDSGAAVES RVGLALTLGVTPPPGSRVTVLGYPAGVGGSPIGCQAATSVTDTGFPALACEGLVDGTSGAPWVSGTTVVGLIGGLERGGC AANMSYSAPFDAQTAELLARAEAGGPGDPIPNDLQDAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27790; Mature: 27790
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKAMRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGP CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCC VEPDRRIGAIFIDGGPLHVCTGSVLHSVAGNLIITAAHCLAGASLITFVPGFAGDAAPGP CCCCCCEEEEEECCCCEEEHHHHHHHHHHCCEEEHHHHHHHCCHHHHHCCCCCCCCCCCC ADVWKADAVYLDPRWTNGKDPHADYAVARVSNDSGAAVESRVGLALTLGVTPPPGSRVTV HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCEEEEECCCCCCCCEEEE LGYPAGVGGSPIGCQAATSVTDTGFPALACEGLVDGTSGAPWVSGTTVVGLIGGLERGGC EEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE AANMSYSAPFDAQTAELLARAEAGGPGDPIPNDLQDAC ECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MMKAMRVPILMLCSVVGVAASLTSCHRPVEHVSGAPVSAPRVGGPVQRLSQPEQKAVAGP CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHCCCHHHHCCCC VEPDRRIGAIFIDGGPLHVCTGSVLHSVAGNLIITAAHCLAGASLITFVPGFAGDAAPGP CCCCCCEEEEEECCCCEEEHHHHHHHHHHCCEEEHHHHHHHCCHHHHHCCCCCCCCCCCC ADVWKADAVYLDPRWTNGKDPHADYAVARVSNDSGAAVESRVGLALTLGVTPPPGSRVTV HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCEEEEECCCCCCCCEEEE LGYPAGVGGSPIGCQAATSVTDTGFPALACEGLVDGTSGAPWVSGTTVVGLIGGLERGGC EEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE AANMSYSAPFDAQTAELLARAEAGGPGDPIPNDLQDAC ECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA