| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408926
Identifier: 41408926
GI number: 41408926
Start: 3155120
End: 3156181
Strand: Reverse
Name: 41408926
Synonym: MAP2828c
Alternate gene names: NA
Gene position: 3156181-3155120 (Counterclockwise)
Preceding gene: 41408928
Following gene: 41408925
Centisome position: 65.35
GC content: 73.73
Gene sequence:
>1062_bases ATGACCACGCATCGACAACCCGACTTCACGCTTTCCCGCCCGGGCGCGCTCATCGCCGCGCTGCCCGCCGTTCTCGGCTT CGTCCCCGAAAGTTCATTGGTACTGGTGTCTTTGGAGGACGGGCGGCTCGGATCGGTGCTGCGCGTCGACCTGTCCGACG AGTTGGCGCACCGGGTCGACCACCTGGCCGAGGTGACCGCCGCGGCCCGGCCCGAGGCGGTGATCGCGGTGATCGTCGAC GCGGCCGGGGCGCCCTGCCCGAGCTGCAACGAGGACTACCGACAGCTGTGCGATGCGCTGTTAGAAGCGTTGGCGCGCAA CGACATTGAGCTGTATGCCGCGCATGTGGTGGACCGGGTCGCGCTGGGCGGCCGTTGGCACTGCGTCGACGGCTGCGGGG CCAGCGGCCTCATCGACGACCCGTCGGCGTCGCCGCTGGCCGCCGCGGCGGTGCTGGACGGCAGGCGGCTCTACGCGCGG CGCGCCGATCTGCAGGCGGTCATCGCCGTCGAGGACCCCGAGCGCAGCGCGGCGTTGACGGCCGCGGTCCGGCGTCAGGC CGGCCGGCGGACCGCGGCGCTCCGGGCGAATCCGGTGCGCCGCACCCGCGGCGACGTGGAAAAGGCCATGGCCGCCGCCG CCCGGGTGTCATCCGGTGAGGCGCTGTCCGACACCGAGCTGGCGAGGCTGGGCTGCGCGCTGAGTGACCCTCAGGTGCGC GACATGCTCTACGCGCTGGCCGTCGGCGAGGGCGCCGACGAGGTCGAATCGCTGTGGGCGGTGCTGGCGCGCACGCTGCC CGAGCCGTGGCGGGTCGAGGCGCTGGTGCTGGTCGCGTTCAGCGCCTACGCCCGTGGCGACGGTCCGCTGGCCGGGGTGT CGCTGGTCGAGGCGCTGCGCTGCGAGCCCGGGCATCGGATGGCCGGCATGCTGGACACCGCATTGCAGTCGGGTCTGCGG CCCGAGGACATCCGGGACCTGGCGCGCACCGGCTACCGGCTGGCCAAACAGTTCGGCGTGCGGCTGCCGCCGCGGCGGCC ATTCGGCCGCAGGGCCGGCTGA
Upstream 100 bases:
>100_bases ACAGTAGAGCAGCTCAACTCACAGTGCTGGGTTCATCCACAGCTGTGCTGCCGCGCGGGCGCGCACCCGGTGACGGTGGC GGCCGTCAGCGTGGGTGCTC
Downstream 100 bases:
>100_bases AACGTTCGGCTGCAGGGCCGGCTGAAGGGGAGAAGCGGTGCGGCTCAGACCTTTTCGACCTTGACCGCGTGGGCCATCTC GTGCGGCAGGGTGACGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTTHRQPDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELAHRVDHLAEVTAAARPEAVIAVIVD AAGAPCPSCNEDYRQLCDALLEALARNDIELYAAHVVDRVALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRRLYAR RADLQAVIAVEDPERSAALTAAVRRQAGRRTAALRANPVRRTRGDVEKAMAAAARVSSGEALSDTELARLGCALSDPQVR DMLYALAVGEGADEVESLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALRCEPGHRMAGMLDTALQSGLR PEDIRDLARTGYRLAKQFGVRLPPRRPFGRRAG
Sequences:
>Translated_353_residues MTTHRQPDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELAHRVDHLAEVTAAARPEAVIAVIVD AAGAPCPSCNEDYRQLCDALLEALARNDIELYAAHVVDRVALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRRLYAR RADLQAVIAVEDPERSAALTAAVRRQAGRRTAALRANPVRRTRGDVEKAMAAAARVSSGEALSDTELARLGCALSDPQVR DMLYALAVGEGADEVESLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALRCEPGHRMAGMLDTALQSGLR PEDIRDLARTGYRLAKQFGVRLPPRRPFGRRAG >Mature_352_residues TTHRQPDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELAHRVDHLAEVTAAARPEAVIAVIVDA AGAPCPSCNEDYRQLCDALLEALARNDIELYAAHVVDRVALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRRLYARR ADLQAVIAVEDPERSAALTAAVRRQAGRRTAALRANPVRRTRGDVEKAMAAAARVSSGEALSDTELARLGCALSDPQVRD MLYALAVGEGADEVESLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALRCEPGHRMAGMLDTALQSGLRP EDIRDLARTGYRLAKQFGVRLPPRRPFGRRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37537; Mature: 37406
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHRQPDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELAHRVD CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHH HLAEVTAAARPEAVIAVIVDAAGAPCPSCNEDYRQLCDALLEALARNDIELYAAHVVDRV HHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRRLYARRADLQAVIAVEDPERSAALT HCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHHHHHH AAVRRQAGRRTAALRANPVRRTRGDVEKAMAAAARVSSGEALSDTELARLGCALSDPQVR HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHH DMLYALAVGEGADEVESLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALR HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH CEPGHRMAGMLDTALQSGLRPEDIRDLARTGYRLAKQFGVRLPPRRPFGRRAG CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TTHRQPDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELAHRVD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHH HLAEVTAAARPEAVIAVIVDAAGAPCPSCNEDYRQLCDALLEALARNDIELYAAHVVDRV HHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRRLYARRADLQAVIAVEDPERSAALT HCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHHHHHH AAVRRQAGRRTAALRANPVRRTRGDVEKAMAAAARVSSGEALSDTELARLGCALSDPQVR HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHH DMLYALAVGEGADEVESLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALR HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH CEPGHRMAGMLDTALQSGLRPEDIRDLARTGYRLAKQFGVRLPPRRPFGRRAG CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA