Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is ideR

Identifier: 41408925

GI number: 41408925

Start: 3154490

End: 3155059

Strand: Reverse

Name: ideR

Synonym: MAP2827c

Alternate gene names: NA

Gene position: 3155059-3154490 (Counterclockwise)

Preceding gene: 41408926

Following gene: 41408922

Centisome position: 65.33

GC content: 71.75

Gene sequence:

>570_bases
TTGACCGCGTGGGCCATCTCGTGCGGCAGGGTGACGTTCTCGTGGCCGGGGATGACGATCGTCACCCCCGCGGGGCCGGT
CTCCACGGTCACCCGGGCGTTGGGCACCACACCGGCGTCCTTGAGCCGCGAGATCAGGTCGATGTCACCCTGGACGTGCT
CGGTGAGCTGGCGCACCACCACGGCCACCGGGGCGCCGGACGGCAACTCGGTGAGCCGGACCAGGTTGGCCTCCTCGGCG
CCGGATTCGGGCCCCACGCCCAGGTCCAGCAGCCCGGGAATCGGGTTGCCGAACGGCGAGGTGGTGGGGTTGTTCAGCAC
CTTGACCAGGCGCCGCTCGACGTCCTCGCTCATCACGTGCTCCCAGCGGCACGCCTCGGCGTGCACTTCCTCCCAGGGCA
GCCGGATGACGTCGACCAGCAGCCGCTCGGCCAGCCGGTGCTTGCGCATCACGGCCACGGCCAGCGCCCGGCCCTTGTCG
GTGAGCTCGAGGTGGCGGTCGCCGGCGACGTGCAGCAGCCCGTCGCGCTCCATCCGGGACACGGTTTGGCTGACGGTCGG
CCCGCTCTGA

Upstream 100 bases:

>100_bases
GCTGCCGCCGCGGCGGCCATTCGGCCGCAGGGCCGGCTGAAACGTTCGGCTGCAGGGCCGGCTGAAGGGGAGAAGCGGTG
CGGCTCAGACCTTTTCGACC

Downstream 100 bases:

>100_bases
TCGAGGCGTTCGGCGATCCGGGCACGCAGCGGCGTCACGCCCTCTTCTTCGAGGTCGTAGATGGTCCGCAGATACATCTC
GGTGGTGTCAACCAGGTCGT

Product: IdeR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTAWAISCGRVTFSWPGMTIVTPAGPVSTVTRALGTTPASLSREIRSMSPWTCSVSWRTTTATGAPDGNSVSRTRLASSA
PDSGPTPRSSSPGIGLPNGEVVGLFSTLTRRRSTSSLITCSQRHASACTSSQGSRMTSTSSRSASRCLRITATASARPLS
VSSRWRSPATCSSPSRSIRDTVWLTVGPL

Sequences:

>Translated_189_residues
MTAWAISCGRVTFSWPGMTIVTPAGPVSTVTRALGTTPASLSREIRSMSPWTCSVSWRTTTATGAPDGNSVSRTRLASSA
PDSGPTPRSSSPGIGLPNGEVVGLFSTLTRRRSTSSLITCSQRHASACTSSQGSRMTSTSSRSASRCLRITATASARPLS
VSSRWRSPATCSSPSRSIRDTVWLTVGPL
>Mature_188_residues
TAWAISCGRVTFSWPGMTIVTPAGPVSTVTRALGTTPASLSREIRSMSPWTCSVSWRTTTATGAPDGNSVSRTRLASSAP
DSGPTPRSSSPGIGLPNGEVVGLFSTLTRRRSTSSLITCSQRHASACTSSQGSRMTSTSSRSASRCLRITATASARPLSV
SSRWRSPATCSSPSRSIRDTVWLTVGPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19754; Mature: 19623

Theoretical pI: Translated: 12.37; Mature: 12.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWAISCGRVTFSWPGMTIVTPAGPVSTVTRALGTTPASLSREIRSMSPWTCSVSWRTT
CCEEEEEECEEEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEE
TATGAPDGNSVSRTRLASSAPDSGPTPRSSSPGIGLPNGEVVGLFSTLTRRRSTSSLITC
ECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEE
SQRHASACTSSQGSRMTSTSSRSASRCLRITATASARPLSVSSRWRSPATCSSPSRSIRD
CHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCE
TVWLTVGPL
EEEEEECCC
>Mature Secondary Structure 
TAWAISCGRVTFSWPGMTIVTPAGPVSTVTRALGTTPASLSREIRSMSPWTCSVSWRTT
CEEEEEECEEEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEE
TATGAPDGNSVSRTRLASSAPDSGPTPRSSSPGIGLPNGEVVGLFSTLTRRRSTSSLITC
ECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEE
SQRHASACTSSQGSRMTSTSSRSASRCLRITATASARPLSVSSRWRSPATCSSPSRSIRD
CHHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCE
TVWLTVGPL
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA