Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408911

Identifier: 41408911

GI number: 41408911

Start: 3143681

End: 3144454

Strand: Reverse

Name: 41408911

Synonym: MAP2813c

Alternate gene names: NA

Gene position: 3144454-3143681 (Counterclockwise)

Preceding gene: 41408912

Following gene: 41408909

Centisome position: 65.11

GC content: 73.26

Gene sequence:

>774_bases
ATGGCTGTATTCGGTAGGCGCGCCCGCAGGGGCGACGAGGACACCCCGGTCGGCGCGGAGATCCCCGAACCCGACCCGGT
GGTGGCGCACGACGACGCGGACGAGCAGGCCGCCGACGAGCTCGAGGGTCCGTTCGACATCGACGATTTCGACGACCCCG
CCGTGGCGGAGCTGGCCCGGCTGGACCTGGGCTCGGTGCTGATCCCGATGCCGGAGGCCGGCCAACTGCAGGTGGAGTTG
ACCGAAACCGGTGTGCCGAGCGCGGTTTGGGTCGTCACGGCCAACGGCCGTTTCACCATCGCGGCCTACGCGGCGCCCAA
GACCGGCGGGCTGTGGCGCGAGGTGGCCGCCGAGCTGGCCGAGTCGCTGCGCAACGACTCGGCCAAGGTCAGCATCCAGG
ACGGGCCCTGGGGGCGGGAGGTGGTTGGCACCGCCGCCGGCGTGGTGCGCTTCATCGGCGTCGACGGCTACCGGTGGATG
ATCCGCTGCGTCGTCAACGGCACCCACGAGACGATGGAGGCACTCGAGCAGGAAGCGCGAGCGGCGTTGGCGGACACCGT
CGTTCGCCGCGGCGACACACCCCTTCCGGTGCGCACGCCGCTGCCGGTGCAGCTGCCCGAGCCGATGGCCCAGCAGCTGC
GGGAGGCCGCGGCCGCGCAGCAGGCCGCCGCGCAGCAAGCCCAGTCCCAGCAGTCGCCGGGCAACGAGCCGGCCGCGCGG
CGCAGCGCCGACGGGTCGGCCATGCAACAGCTGCGCACCACCACCGGCGGCTGA

Upstream 100 bases:

>100_bases
GCGGACACGCGAGTCTGTGATGCGCGCCGGCGAGGATTTCACGAGGAGGCGCGATGAGGCGCGATGAGGTGGGCACCCCA
CCCGGGGAAGAGCGGCGCTG

Downstream 100 bases:

>100_bases
CTCGGCCGCTCGGGACTACAGCTCGGCCAGCGCGGCCAGGCAGGCCGCGCCCAGGGCGGCGGGGTCGGCGCCGATCTGAT
CCAGCGTCACCGTGCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAVFGRRARRGDEDTPVGAEIPEPDPVVAHDDADEQAADELEGPFDIDDFDDPAVAELARLDLGSVLIPMPEAGQLQVEL
TETGVPSAVWVVTANGRFTIAAYAAPKTGGLWREVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWM
IRCVVNGTHETMEALEQEARAALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSPGNEPAAR
RSADGSAMQQLRTTTGG

Sequences:

>Translated_257_residues
MAVFGRRARRGDEDTPVGAEIPEPDPVVAHDDADEQAADELEGPFDIDDFDDPAVAELARLDLGSVLIPMPEAGQLQVEL
TETGVPSAVWVVTANGRFTIAAYAAPKTGGLWREVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWM
IRCVVNGTHETMEALEQEARAALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSPGNEPAAR
RSADGSAMQQLRTTTGG
>Mature_256_residues
AVFGRRARRGDEDTPVGAEIPEPDPVVAHDDADEQAADELEGPFDIDDFDDPAVAELARLDLGSVLIPMPEAGQLQVELT
ETGVPSAVWVVTANGRFTIAAYAAPKTGGLWREVAAELAESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWMI
RCVVNGTHETMEALEQEARAALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSPGNEPAARR
SADGSAMQQLRTTTGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27313; Mature: 27181

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFGRRARRGDEDTPVGAEIPEPDPVVAHDDADEQAADELEGPFDIDDFDDPAVAELAR
CCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
LDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTANGRFTIAAYAAPKTGGLWREVAAELA
HCCCCEEECCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH
ESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWMIRCVVNGTHETMEALEQEAR
HHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEHEECCCCHHHHHHHHHHHH
AALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSPGNEPAAR
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RSADGSAMQQLRTTTGG
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AVFGRRARRGDEDTPVGAEIPEPDPVVAHDDADEQAADELEGPFDIDDFDDPAVAELAR
CCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
LDLGSVLIPMPEAGQLQVELTETGVPSAVWVVTANGRFTIAAYAAPKTGGLWREVAAELA
HCCCCEEECCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH
ESLRNDSAKVSIQDGPWGREVVGTAAGVVRFIGVDGYRWMIRCVVNGTHETMEALEQEAR
HHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEHEECCCCHHHHHHHHHHHH
AALADTVVRRGDTPLPVRTPLPVQLPEPMAQQLREAAAAQQAAAQQAQSQQSPGNEPAAR
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
RSADGSAMQQLRTTTGG
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA