| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408910
Identifier: 41408910
GI number: 41408910
Start: 3142967
End: 3143665
Strand: Direct
Name: 41408910
Synonym: MAP2812
Alternate gene names: NA
Gene position: 3142967-3143665 (Clockwise)
Preceding gene: 41408907
Following gene: 41408913
Centisome position: 65.07
GC content: 78.68
Gene sequence:
>699_bases GTGGTGGTCGATCTGCGCGGCGTCAGGGCCGTGTTGTTGCCCGGCACCGGCTCCGACGACGACTACATTCACCGGGCATT CTCGGGTCCGCTCGCCGGGGTGGGCGCGGTGCTGGTGGCCCCGCCGCCGCGGCCCGACCGGTTGGTGGCGGGCTATCTGG AGGCGCTGAACGACGCGGCGCGCCGAGGGCCGATCGCGGTCGGCGGCGTGTCGATCGGCGCGGCCGTGGCGGCCGCGTGG GCGCTGGCCCATCCCGATCGGGCGGTCGCGGTGCTGGCCGCGCTGCCGGCCTGGGCCGGGGCCCCCGAGGAGGCGCCGGC CGCGCTGGCGGCACGCTATTCGGCCGCGCGGTTGCGCGCCGACGGGCTGGCGGCGACGACGATCCAGATGCGCGCGTCCA GCCCGGCGTGGCTGGCCGACGAGCTGACCCGCTCGTGGGGCGCGCAGTGGCCGCACCTGCCCGACGCCATGGAAGAGGCG GCCGGCTACGTGGCGCCGAGCCGCGACGAGCTGGCCGGGTTGACCGCGCCGCTGGCGGTGGCGGCCGCGCTCGACGACCC GATTCACCCGCTGCAGGCGGGCCGGGACTGGGTGGCCGCCGCGCCGCGGGCGGCGCTGCGCACGGTGACGCTGGATCAGA TCGGCGCCGACCCCGCCGCCCTGGGCGCGGCCTGCCTGGCCGCGCTGGCCGAGCTGTAG
Upstream 100 bases:
>100_bases ATTTATGCCAACGGACACCGTAGACCTCTTGGTTCCCCCGCGCCAACCGACTCAAACACCCCGGTTGGAGCCCCGGTGAA CGCCGGGGCACTATCAAGGG
Downstream 100 bases:
>100_bases TCCCGAGCGGCCGAGTCAGCCGCCGGTGGTGGTGCGCAGCTGTTGCATGGCCGACCCGTCGGCGCTGCGCCGCGCGGCCG GCTCGTTGCCCGGCGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MVVDLRGVRAVLLPGTGSDDDYIHRAFSGPLAGVGAVLVAPPPRPDRLVAGYLEALNDAARRGPIAVGGVSIGAAVAAAW ALAHPDRAVAVLAALPAWAGAPEEAPAALAARYSAARLRADGLAATTIQMRASSPAWLADELTRSWGAQWPHLPDAMEEA AGYVAPSRDELAGLTAPLAVAAALDDPIHPLQAGRDWVAAAPRAALRTVTLDQIGADPAALGAACLAALAEL
Sequences:
>Translated_232_residues MVVDLRGVRAVLLPGTGSDDDYIHRAFSGPLAGVGAVLVAPPPRPDRLVAGYLEALNDAARRGPIAVGGVSIGAAVAAAW ALAHPDRAVAVLAALPAWAGAPEEAPAALAARYSAARLRADGLAATTIQMRASSPAWLADELTRSWGAQWPHLPDAMEEA AGYVAPSRDELAGLTAPLAVAAALDDPIHPLQAGRDWVAAAPRAALRTVTLDQIGADPAALGAACLAALAEL >Mature_232_residues MVVDLRGVRAVLLPGTGSDDDYIHRAFSGPLAGVGAVLVAPPPRPDRLVAGYLEALNDAARRGPIAVGGVSIGAAVAAAW ALAHPDRAVAVLAALPAWAGAPEEAPAALAARYSAARLRADGLAATTIQMRASSPAWLADELTRSWGAQWPHLPDAMEEA AGYVAPSRDELAGLTAPLAVAAALDDPIHPLQAGRDWVAAAPRAALRTVTLDQIGADPAALGAACLAALAEL
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23507; Mature: 23507
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDLRGVRAVLLPGTGSDDDYIHRAFSGPLAGVGAVLVAPPPRPDRLVAGYLEALNDAA CEEECCCCEEEEECCCCCCHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHH RRGPIAVGGVSIGAAVAAAWALAHPDRAVAVLAALPAWAGAPEEAPAALAARYSAARLRA HHCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DGLAATTIQMRASSPAWLADELTRSWGAQWPHLPDAMEEAAGYVAPSRDELAGLTAPLAV CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH AAALDDPIHPLQAGRDWVAAAPRAALRTVTLDQIGADPAALGAACLAALAEL HHHHCCCCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVVDLRGVRAVLLPGTGSDDDYIHRAFSGPLAGVGAVLVAPPPRPDRLVAGYLEALNDAA CEEECCCCEEEEECCCCCCHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHH RRGPIAVGGVSIGAAVAAAWALAHPDRAVAVLAALPAWAGAPEEAPAALAARYSAARLRA HHCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DGLAATTIQMRASSPAWLADELTRSWGAQWPHLPDAMEEAAGYVAPSRDELAGLTAPLAV CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH AAALDDPIHPLQAGRDWVAAAPRAALRTVTLDQIGADPAALGAACLAALAEL HHHHCCCCCHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA