| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408860
Identifier: 41408860
GI number: 41408860
Start: 3093855
End: 3094295
Strand: Reverse
Name: 41408860
Synonym: MAP2762c
Alternate gene names: NA
Gene position: 3094295-3093855 (Counterclockwise)
Preceding gene: 41408861
Following gene: 41408859
Centisome position: 64.07
GC content: 62.59
Gene sequence:
>441_bases ATGAGCGACGAGTTACGCCAGCGCTACAAGGTGATTTTCGATGCAGTCCGGGTGAGCGAAATCGAGATCACCCCGGATCT TGCGCGGTGCCTCGTGCACTGGCTCGGTGATTACATCCGGCTCAAGCAGCAGCCTGGGCAGCCCGGTGTCCCGGAGGGGT TAGTTGCGGCGCAGACGGCGCTTGCCGAGGCGTACGCCGCGGTTACTCACTCGCCTCGAAGCGAGCGGGATCGCCCGATC GGGGCTGGATTCGTATTCTCAGCCCATGACGCGTGGGTGGGCACTGCGGAAGCCGCTGAGATGCTCGGGATCAAGGCGGG CAGCGTCGGTTGGCTTTGCCGGGAGAGTCATCTTGAGCACCGGAAAGTTGGCCGGCAGTACATGATTTCGACCGCATCGA TCGAGGACTACAAACGCCGCAAGGCTGAAAGGAGCGCGTGA
Upstream 100 bases:
>100_bases GGGTACGGCCACCGCAACGTCGGATTGCCGATGAGATTGCGGCCCGGCGGACAGCTCGGCAGGCCGCGGCCGCTGCCGAT GCGAAGAGCGCGGACCGCTG
Downstream 100 bases:
>100_bases TGGGCATGGTCAACGTGCCGCGTGCGGAACTTGCGCGGCTGGTGGGGGTTTCGCCGGACGTCGACGATCTAACGTTGCAG CAGGCCATCGATTCCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSDELRQRYKVIFDAVRVSEIEITPDLARCLVHWLGDYIRLKQQPGQPGVPEGLVAAQTALAEAYAAVTHSPRSERDRPI GAGFVFSAHDAWVGTAEAAEMLGIKAGSVGWLCRESHLEHRKVGRQYMISTASIEDYKRRKAERSA
Sequences:
>Translated_146_residues MSDELRQRYKVIFDAVRVSEIEITPDLARCLVHWLGDYIRLKQQPGQPGVPEGLVAAQTALAEAYAAVTHSPRSERDRPI GAGFVFSAHDAWVGTAEAAEMLGIKAGSVGWLCRESHLEHRKVGRQYMISTASIEDYKRRKAERSA >Mature_145_residues SDELRQRYKVIFDAVRVSEIEITPDLARCLVHWLGDYIRLKQQPGQPGVPEGLVAAQTALAEAYAAVTHSPRSERDRPIG AGFVFSAHDAWVGTAEAAEMLGIKAGSVGWLCRESHLEHRKVGRQYMISTASIEDYKRRKAERSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16264; Mature: 16132
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDELRQRYKVIFDAVRVSEIEITPDLARCLVHWLGDYIRLKQQPGQPGVPEGLVAAQTA CCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAEAYAAVTHSPRSERDRPIGAGFVFSAHDAWVGTAEAAEMLGIKAGSVGWLCRESHLEH HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH RKVGRQYMISTASIEDYKRRKAERSA HHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure SDELRQRYKVIFDAVRVSEIEITPDLARCLVHWLGDYIRLKQQPGQPGVPEGLVAAQTA CHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAEAYAAVTHSPRSERDRPIGAGFVFSAHDAWVGTAEAAEMLGIKAGSVGWLCRESHLEH HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH RKVGRQYMISTASIEDYKRRKAERSA HHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA