| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408848
Identifier: 41408848
GI number: 41408848
Start: 3080777
End: 3081214
Strand: Reverse
Name: 41408848
Synonym: MAP2750c
Alternate gene names: NA
Gene position: 3081214-3080777 (Counterclockwise)
Preceding gene: 41408854
Following gene: 41408847
Centisome position: 63.8
GC content: 67.81
Gene sequence:
>438_bases GTGAGTAAGGTAACCCTAACTACCGAGCTGCCGATCCCGGTGGAAACCGCGTCGGCGCTGGCCCGCAAGCCCGAGATGAT GCGCCACGTGCTCAGCCCGGTGCTGCGGATCTACCGCCTCGACGTCCCCAAGCGCATCGAGGTCGGCACCCAGGGATCAG CGCGATTCTGGTTGTTCGGAGTGATCCCCGCCTGGACGCATCACCTCACCATCAAGCGGCTCGACCCCACCGAGATCTAC ACCAACGAGCACGGCGGACCCGTCCGCACCTGGAACCACCGCCTGACCTTCGAGCCCATCGACGAGGGCAGCTGCCGCTA CACCGACGAGATCGAAACCGACGACGGCCTGCGCGGCCTGCCGACCCGCGCCTTCGCCCGGGTCATGTTCCGCCACCGGC ACCGGCGGTGGCGCAGGCTCGCGCGGATCCTGCACTGA
Upstream 100 bases:
>100_bases GCTGGGTCGATCCCAGCCGGGACCACCGTCATTAAGGCCGTTTGGCCACCGGTGCGGTCGGCTATTGCCTGATCGCGCCC GCTGGGCCACCATAAACGGC
Downstream 100 bases:
>100_bases CAGCGAGAGGACGGTGAACCATGGCCGGCAATCAAGAAGGCATCGGCATGCTGAAACTCGAATGCCCGCAACACCATCCC GTCGGCAGGATCCTCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSKVTLTTELPIPVETASALARKPEMMRHVLSPVLRIYRLDVPKRIEVGTQGSARFWLFGVIPAWTHHLTIKRLDPTEIY TNEHGGPVRTWNHRLTFEPIDEGSCRYTDEIETDDGLRGLPTRAFARVMFRHRHRRWRRLARILH
Sequences:
>Translated_145_residues MSKVTLTTELPIPVETASALARKPEMMRHVLSPVLRIYRLDVPKRIEVGTQGSARFWLFGVIPAWTHHLTIKRLDPTEIY TNEHGGPVRTWNHRLTFEPIDEGSCRYTDEIETDDGLRGLPTRAFARVMFRHRHRRWRRLARILH >Mature_144_residues SKVTLTTELPIPVETASALARKPEMMRHVLSPVLRIYRLDVPKRIEVGTQGSARFWLFGVIPAWTHHLTIKRLDPTEIYT NEHGGPVRTWNHRLTFEPIDEGSCRYTDEIETDDGLRGLPTRAFARVMFRHRHRRWRRLARILH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17030; Mature: 16899
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVTLTTELPIPVETASALARKPEMMRHVLSPVLRIYRLDVPKRIEVGTQGSARFWLFG CCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEE VIPAWTHHLTIKRLDPTEIYTNEHGGPVRTWNHRLTFEPIDEGSCRYTDEIETDDGLRGL CCCHHHHEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCC PTRAFARVMFRHRHRRWRRLARILH CHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKVTLTTELPIPVETASALARKPEMMRHVLSPVLRIYRLDVPKRIEVGTQGSARFWLFG CCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEE VIPAWTHHLTIKRLDPTEIYTNEHGGPVRTWNHRLTFEPIDEGSCRYTDEIETDDGLRGL CCCHHHHEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCC PTRAFARVMFRHRHRRWRRLARILH CHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA