Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yfcA [C]

Identifier: 41408841

GI number: 41408841

Start: 3074503

End: 3075288

Strand: Reverse

Name: yfcA [C]

Synonym: MAP2743c

Alternate gene names: 41408841

Gene position: 3075288-3074503 (Counterclockwise)

Preceding gene: 41408842

Following gene: 41408839

Centisome position: 63.67

GC content: 71.37

Gene sequence:

>786_bases
GTGTCGCCATTTCAGATGTTCGTCATATGCCTGGCCGGGCTGGCCGCCGGTGCGATCAACGCGCTGGTCGGGTCCGGCAC
CCTGATCACCTTCCCGACGCTGGTGGCGCTCGGCTATCCGCCGGTGACGGCCACCATGTCCAACGCCACCGGCCTGGTCG
CCGGCAGCGTCTCGGGCACCTGGGGCTATCGCGCCGAGCTGCGCGGTCAGTGGGACCGGCTGCGCTGGCAGCTGCCGGCC
TCGCTGGCCGGCGCCGGGCTGGGCGCCTATCTGCTGCTGCATCTGCCGGAGAAGGTGTTCGCCGAGATCGTGCCGGTGCT
GCTGGTGGCGGCGCTGGTCCTGGTGGTGACCGGACCGCGGATCCAGGCGTGGACGGCCCGGCGCGCCGAGCAGGCGGGCC
GCTCACCCGAACACGTGCCACCCGGGCGGATGGCGACGCTGGTGTTCGGCACCTTCGCCGTCGGCGTCTATGGCGGCTAT
TTCACTGCCGCCCAGGGCATTTTGCTGGTCGGCCTGATGGGGGCACTGCTGCCCGAATCGGTGCAGCGGATGAACGCCGC
CAAGAATCTGCTGGCCCTGGTGGTGAATGTGGTTGCGGCGGTTGCCTATACGTCGGTGGCGTTCGGCCGGATCAGCTGGG
CGGCGGCCGGGCTGATCGCGGCGGGCTCGCTGGTCGGCGGGCTGCTCGGCGCCCGGTACGGGCGCCGGCTGTCCGGCGGC
GCGCTGCGGGCCATCATCGTTGTGGTGGGGCTGATCGGGCTCTACCGACTGCTCGCGGTGGCATGA

Upstream 100 bases:

>100_bases
AGTTGCGGACCGGGGTGGATCGCGGCGCGCAAGCCCCGCCGGTGTGACCTTGGCCCCTTGGTCTGCGCCGAAATCGGCGG
CAGGCTAAGGTTTTTCTCCG

Downstream 100 bases:

>100_bases
CGAAACAGCCGCTGCAGCAAAGGTTTTGGTGCTACCCGGTGCTCACCAGCGGTCGGCGCCGGACAGCGCGGAGTCGACCG
TGGGGTAGATCGGCAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSPFQMFVICLAGLAAGAINALVGSGTLITFPTLVALGYPPVTATMSNATGLVAGSVSGTWGYRAELRGQWDRLRWQLPA
SLAGAGLGAYLLLHLPEKVFAEIVPVLLVAALVLVVTGPRIQAWTARRAEQAGRSPEHVPPGRMATLVFGTFAVGVYGGY
FTAAQGILLVGLMGALLPESVQRMNAAKNLLALVVNVVAAVAYTSVAFGRISWAAAGLIAAGSLVGGLLGARYGRRLSGG
ALRAIIVVVGLIGLYRLLAVA

Sequences:

>Translated_261_residues
MSPFQMFVICLAGLAAGAINALVGSGTLITFPTLVALGYPPVTATMSNATGLVAGSVSGTWGYRAELRGQWDRLRWQLPA
SLAGAGLGAYLLLHLPEKVFAEIVPVLLVAALVLVVTGPRIQAWTARRAEQAGRSPEHVPPGRMATLVFGTFAVGVYGGY
FTAAQGILLVGLMGALLPESVQRMNAAKNLLALVVNVVAAVAYTSVAFGRISWAAAGLIAAGSLVGGLLGARYGRRLSGG
ALRAIIVVVGLIGLYRLLAVA
>Mature_260_residues
SPFQMFVICLAGLAAGAINALVGSGTLITFPTLVALGYPPVTATMSNATGLVAGSVSGTWGYRAELRGQWDRLRWQLPAS
LAGAGLGAYLLLHLPEKVFAEIVPVLLVAALVLVVTGPRIQAWTARRAEQAGRSPEHVPPGRMATLVFGTFAVGVYGGYF
TAAQGILLVGLMGALLPESVQRMNAAKNLLALVVNVVAAVAYTSVAFGRISWAAAGLIAAGSLVGGLLGARYGRRLSGGA
LRAIIVVVGLIGLYRLLAVA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26862; Mature: 26731

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPFQMFVICLAGLAAGAINALVGSGTLITFPTLVALGYPPVTATMSNATGLVAGSVSGT
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCC
WGYRAELRGQWDRLRWQLPASLAGAGLGAYLLLHLPEKVFAEIVPVLLVAALVLVVTGPR
CCCHHHHCCCHHHHHHHCCHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
IQAWTARRAEQAGRSPEHVPPGRMATLVFGTFAVGVYGGYFTAAQGILLVGLMGALLPES
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRMNAAKNLLALVVNVVAAVAYTSVAFGRISWAAAGLIAAGSLVGGLLGARYGRRLSGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ALRAIIVVVGLIGLYRLLAVA
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA