Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408837

Identifier: 41408837

GI number: 41408837

Start: 3071699

End: 3072589

Strand: Direct

Name: 41408837

Synonym: MAP2739

Alternate gene names: NA

Gene position: 3071699-3072589 (Clockwise)

Preceding gene: 41408835

Following gene: 41408838

Centisome position: 63.6

GC content: 70.93

Gene sequence:

>891_bases
CTGGCCCGGCGACTCGCGCACGCTTGGCTGGCATGGCTCCACGGTAACCAGTCGCCGGCCCGGCTTCGCGTTATTCTCGG
CTTCGTGAGCGGGGCCATTCACCCTGGATACCGCCGTTACGTCGCCATCGGCGACAGCCAGACCGAGGGCCTGTGGGACG
GCGACGACGGCACGGGCCTGCTCGGATTCGCCGACCGCCTCGCCGCGATGCTCGATTCGGCGTATCCCGGGCTGCAATAC
GCCAACCTCGCGATCCGCGGCAAACGGATCGGCCACGTGCTGGCCGAGCAGGTCCCGGCGGCCCTGGCGATGCGGCCGGA
CCTGATCACGGTGTGCGCCGGCATGAACGACGTCATCCAGCCCGGGCGCTCGTTCGGCCCGGCCCTGACCGACCTGGACC
ACATCTACGCCGCGCTGGCCGGATCGGGCGCGACGGTGGTGACGACGACCTTTCCGAACGTCGCGCAGTTCCTGCCGCTG
GGCCGGCTGGTAGCCGGGCGGCTGACCCGGATCAACGCGGTCATCCGGGCGGCCGCGAACCGGCACGGGTTCCGGCTGGT
CGACCTGTACAGCGCACCGTCGATGCGGGAGTTGAACACCTGGGCCGTCGACCGGGTGCACGCCTCGACCAAGGGGCACA
TCTTGTTCGCGGCCGCGGCCGCCGAGGCGCTGAATCTGCCTGAAAGCAGCCATGATTGGGCCCTGGGCGGGCAGCAGCGG
GCCCGGCGTTCGGTCGCGGCCGGCGCCTACGAGCAGTGGCGCTGGACGCAGGACAGCTTCGTCCCGTGGGTCTGGCGGCG
GCTGCGCGGGCTCTCGTCGTACGACGGGCGCGAACCCAAACGTCCGCGGCTGCAGGGTGTGGGCAGCGCATCAGGCATCC
TTGACGCATGA

Upstream 100 bases:

>100_bases
TCGGGTTGCTCACCCAGCAGCAGCAACAGCTTGAGCGCGTTGTCGACCGATTCGATTGGATACTGCGGCGCAAGCGCATC
GGCGGCCGGCGCGGCCGCGG

Downstream 100 bases:

>100_bases
ACGTGGAGCCCTTGCTGCACTCGATCCCGCCGCTCGCGGTTTATCTGGTGGTCGGCGGTGTGGTCGGGATCGAGAGCCTG
GGCATTCCGCTGCCAGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipolytic; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; Lipolytic G-D-S-L; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Esterase; SGNH Hydrolase; Lipase/Acylhydrolase; SGNH Hydrolase Family Protein; Lipolytic Protein; Gdsl-Like Lipase; Lipase_GDSL Domain-Containing Protein; Lipase; GDSL-Like Lipase/Acylhydrolase; Secreted Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQY
ANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPL
GRLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR
ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA

Sequences:

>Translated_296_residues
MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQY
ANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPL
GRLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR
ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA
>Mature_295_residues
ARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQYA
NLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLG
RLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQRA
RRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32091; Mature: 31960

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCH
LGFADRLAAMLDSAYPGLQYANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQ
HHHHHHHHHHHHHCCCCCEEEHEEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHC
PGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLGRLVAGRLTRINAVIRAAAN
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHH
ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGL
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCH
LGFADRLAAMLDSAYPGLQYANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQ
HHHHHHHHHHHHHCCCCCEEEHEEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHC
PGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLGRLVAGRLTRINAVIRAAAN
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHH
ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA