Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408831

Identifier: 41408831

GI number: 41408831

Start: 3066063

End: 3067034

Strand: Reverse

Name: 41408831

Synonym: MAP2733c

Alternate gene names: NA

Gene position: 3067034-3066063 (Counterclockwise)

Preceding gene: 41408836

Following gene: 41408830

Centisome position: 63.5

GC content: 73.56

Gene sequence:

>972_bases
ATGGTGGGTCGACCACGAGCGGGTCGATTGCAGAAGGTCGGATCGAAGGTGGTGGCGGCGATCGGCCGCCAGGAGTGGAT
GGACCGGCCGAGCTACCGGTTCGAACACCTGCTCAGCTTCGCCTACAACGGGCTGGGCAGCGCCCGCAACACCGTCACCA
ACGCGCTCAACGGGGTCTGGCTCGGTCACCCGGTGCACCCGCCGCTGGCGTCGCTGACCAGCGGCGCGCTCGGCACCACG
GTGGCGCTGGACGCGCTGAGCGTGCTGCCCGGGCAACCCGCCTCCGAGGTCGTCGGCGCCTCCCGGTTCGCCACCCGCGC
GCTCGGGGTGGGCATCCTGGCCAGCCTGGGTTCGGCCGTCACCGGCGTCACCGACTGGCAGCACACCCACGAGGAGGACC
GCCGGGTCGGCGCTGTGCACGGCCTGCTCAACGTGGCCGCCACCGCGCTGTACGTGCAGTCGTGGTTCGACCGGCGCCGG
GGCCGGCACGGACGCGGCATCCTGCTCACCGCGCTGGGCTACGGCATCACGGTGGCCGGCAGCTACCTGGGCGGGGCGCT
GGTCTTCGAGTCCGGCATCGGCATCGACCAGTCCGGCCCGCGGCTGCGCACCTCGGCCTGGACGCCGGTGCTGCCGGCCA
GTTCGCTCAACGGCAAACCGGTGCGCGTCGAGGTCGACGGCGTCGGGCTGGTCGTCTGCCAGACCAAGCCGGGCGAGGTC
GCCGCGTACGGGGAGTTCTGTCCGCACCTGGCCGCCCCGATGGCCGACGGCTGGCTGGACCGGGGCCGCTTGGTCTGCCC
GTGGCACGGCTCGTGGTTCGCGGCCGAGTCCGGCGAGGTGGTGCGCGGGCCGGCGGCGGCGCCGCTGCCGTGCTACCAGG
CCCGAGTGGTCGACGGAGTGGTCGAGGTCCGCGGCGAGCAGCAGCCCGCTCCCGGCGGCGCGGTCGGAATCGCAAAAGGA
GGAGCCAGTTGA

Upstream 100 bases:

>100_bases
CAGCCATCCCGCGCATGTGAGCGCGGCGCGTTAAGGGGTATCCGTTCGGTTCGGCGTGATGATCGCCGTCTGCCTGCCGG
CGTGAGAAAGGACTGGTGTC

Downstream 100 bases:

>100_bases
ACGCCTACGACGTCTTGAAGGAACACCACATCGTGATCAAGGGCCTCGGCCGCAAGATCAGCGAGGCGCCGGTGAATTCC
GAAGAGCGCCATGCCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Protein; Rieske Fe-S Membrane Protein; Rieske Iron-Sulfur Domain Protein; 2Fe-2S Domain-Containing Protein; Rieske Iron-Sulphur Domain; Iron-Sulfur Protein; Rieske Region; Rieske Iron-Sulphur Domain-Containing Protein

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT
VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR
GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV
AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG
GAS

Sequences:

>Translated_323_residues
MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT
VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR
GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV
AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG
GAS
>Mature_323_residues
MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT
VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR
GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV
AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG
GAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24585130, Length=75, Percent_Identity=37.3333333333333, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33629; Mature: 33629

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEE
LGHPVHPPLASLTSGALGTTVALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAV
ECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRRGRHGRGILLTALGYGITVAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHH
SYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV
HHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE
AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGV
EEHHHHHHHHHCHHHCCHHHCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHH
VEVRGEQQPAPGGAVGIAKGGAS
HHHCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEE
LGHPVHPPLASLTSGALGTTVALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAV
ECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRRGRHGRGILLTALGYGITVAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHH
SYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV
HHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE
AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGV
EEHHHHHHHHHCHHHCCHHHCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHH
VEVRGEQQPAPGGAVGIAKGGAS
HHHCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA