| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408831
Identifier: 41408831
GI number: 41408831
Start: 3066063
End: 3067034
Strand: Reverse
Name: 41408831
Synonym: MAP2733c
Alternate gene names: NA
Gene position: 3067034-3066063 (Counterclockwise)
Preceding gene: 41408836
Following gene: 41408830
Centisome position: 63.5
GC content: 73.56
Gene sequence:
>972_bases ATGGTGGGTCGACCACGAGCGGGTCGATTGCAGAAGGTCGGATCGAAGGTGGTGGCGGCGATCGGCCGCCAGGAGTGGAT GGACCGGCCGAGCTACCGGTTCGAACACCTGCTCAGCTTCGCCTACAACGGGCTGGGCAGCGCCCGCAACACCGTCACCA ACGCGCTCAACGGGGTCTGGCTCGGTCACCCGGTGCACCCGCCGCTGGCGTCGCTGACCAGCGGCGCGCTCGGCACCACG GTGGCGCTGGACGCGCTGAGCGTGCTGCCCGGGCAACCCGCCTCCGAGGTCGTCGGCGCCTCCCGGTTCGCCACCCGCGC GCTCGGGGTGGGCATCCTGGCCAGCCTGGGTTCGGCCGTCACCGGCGTCACCGACTGGCAGCACACCCACGAGGAGGACC GCCGGGTCGGCGCTGTGCACGGCCTGCTCAACGTGGCCGCCACCGCGCTGTACGTGCAGTCGTGGTTCGACCGGCGCCGG GGCCGGCACGGACGCGGCATCCTGCTCACCGCGCTGGGCTACGGCATCACGGTGGCCGGCAGCTACCTGGGCGGGGCGCT GGTCTTCGAGTCCGGCATCGGCATCGACCAGTCCGGCCCGCGGCTGCGCACCTCGGCCTGGACGCCGGTGCTGCCGGCCA GTTCGCTCAACGGCAAACCGGTGCGCGTCGAGGTCGACGGCGTCGGGCTGGTCGTCTGCCAGACCAAGCCGGGCGAGGTC GCCGCGTACGGGGAGTTCTGTCCGCACCTGGCCGCCCCGATGGCCGACGGCTGGCTGGACCGGGGCCGCTTGGTCTGCCC GTGGCACGGCTCGTGGTTCGCGGCCGAGTCCGGCGAGGTGGTGCGCGGGCCGGCGGCGGCGCCGCTGCCGTGCTACCAGG CCCGAGTGGTCGACGGAGTGGTCGAGGTCCGCGGCGAGCAGCAGCCCGCTCCCGGCGGCGCGGTCGGAATCGCAAAAGGA GGAGCCAGTTGA
Upstream 100 bases:
>100_bases CAGCCATCCCGCGCATGTGAGCGCGGCGCGTTAAGGGGTATCCGTTCGGTTCGGCGTGATGATCGCCGTCTGCCTGCCGG CGTGAGAAAGGACTGGTGTC
Downstream 100 bases:
>100_bases ACGCCTACGACGTCTTGAAGGAACACCACATCGTGATCAAGGGCCTCGGCCGCAAGATCAGCGAGGCGCCGGTGAATTCC GAAGAGCGCCATGCCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Protein; Rieske Fe-S Membrane Protein; Rieske Iron-Sulfur Domain Protein; 2Fe-2S Domain-Containing Protein; Rieske Iron-Sulphur Domain; Iron-Sulfur Protein; Rieske Region; Rieske Iron-Sulphur Domain-Containing Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG GAS
Sequences:
>Translated_323_residues MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG GAS >Mature_323_residues MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVWLGHPVHPPLASLTSGALGTT VALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAVTGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRR GRHGRGILLTALGYGITVAGSYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGVVEVRGEQQPAPGGAVGIAKG GAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24585130, Length=75, Percent_Identity=37.3333333333333, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33629; Mature: 33629
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVW CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEE LGHPVHPPLASLTSGALGTTVALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAV ECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRRGRHGRGILLTALGYGITVAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHH SYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV HHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGV EEHHHHHHHHHCHHHCCHHHCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHH VEVRGEQQPAPGGAVGIAKGGAS HHHCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MVGRPRAGRLQKVGSKVVAAIGRQEWMDRPSYRFEHLLSFAYNGLGSARNTVTNALNGVW CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEE LGHPVHPPLASLTSGALGTTVALDALSVLPGQPASEVVGASRFATRALGVGILASLGSAV ECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVTDWQHTHEEDRRVGAVHGLLNVAATALYVQSWFDRRRGRHGRGILLTALGYGITVAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHH SYLGGALVFESGIGIDQSGPRLRTSAWTPVLPASSLNGKPVRVEVDGVGLVVCQTKPGEV HHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE AAYGEFCPHLAAPMADGWLDRGRLVCPWHGSWFAAESGEVVRGPAAAPLPCYQARVVDGV EEHHHHHHHHHCHHHCCHHHCCCEEECCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHH VEVRGEQQPAPGGAVGIAKGGAS HHHCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA