| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408830
Identifier: 41408830
GI number: 41408830
Start: 3065581
End: 3066066
Strand: Reverse
Name: 41408830
Synonym: MAP2732c
Alternate gene names: NA
Gene position: 3066066-3065581 (Counterclockwise)
Preceding gene: 41408831
Following gene: 41408829
Centisome position: 63.48
GC content: 63.99
Gene sequence:
>486_bases TTGAACGCCTACGACGTCTTGAAGGAACACCACATCGTGATCAAGGGCCTCGGCCGCAAGATCAGCGAGGCGCCGGTGAA TTCCGAAGAGCGCCATGCCCTTTTCGACGACCTGCTGATCGAGCTCGACATCCACTTCCGCATCGAGGACGACCTGTATT ACCCGGCCCTCAAGGAGGCCAGCAAGCTGATCGCCGTCGCCCATGCCGAGCATCGCCAGGTCGTCGACCAGCTTTCGGTG CTGCTGCGCACCCCGCAGAGCGCGCCGAACTACGAGGACGAATGGAACTCCTTCAAGACGGTGCTCGAGGCGCACGCCGA CGAGGAGGAACGCGACATGATCCCGGCCCCGCCGCAGGTGCACATCACCGACGCGGAGCTCGAGGAGCTGGGCAACAAGA TGGCCGCCAAGATGGAGCAGTACCGCGGCTCGGCGCTGTACAAGATGCGCACCAAGGGACGCGCGGCGCTGGTGCGTTCG CTCTGA
Upstream 100 bases:
>100_bases CGTGCTACCAGGCCCGAGTGGTCGACGGAGTGGTCGAGGTCCGCGGCGAGCAGCAGCCCGCTCCCGGCGGCGCGGTCGGA ATCGCAAAAGGAGGAGCCAG
Downstream 100 bases:
>100_bases GGCCGACGGTCGACCACACCGCCCGCCTGCCGGATTCGGCGACGGATCGGGAGTAGCCTCACGGCTCATGGACCCCGAGT GTGTCGCTTCTCAGGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEASKLIAVAHAEHRQVVDQLSV LLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQVHITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRS L
Sequences:
>Translated_161_residues MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEASKLIAVAHAEHRQVVDQLSV LLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQVHITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRS L >Mature_161_residues MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEASKLIAVAHAEHRQVVDQLSV LLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQVHITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRS L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012312 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 18415; Mature: 18415
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEA CCHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHH SKLIAVAHAEHRQVVDQLSVLLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEE HITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRSL EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCC >Mature Secondary Structure MNAYDVLKEHHIVIKGLGRKISEAPVNSEERHALFDDLLIELDIHFRIEDDLYYPALKEA CCHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHH SKLIAVAHAEHRQVVDQLSVLLRTPQSAPNYEDEWNSFKTVLEAHADEEERDMIPAPPQV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEE HITDAELEELGNKMAAKMEQYRGSALYKMRTKGRAALVRSL EEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]