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The map label for this gene is pdxT [H]

Identifier: 41408806

GI number: 41408806

Start: 3044408

End: 3044929

Strand: Reverse

Name: pdxT [H]

Synonym: MAP2708c

Alternate gene names: 41408806

Gene position: 3044929-3044408 (Counterclockwise)

Preceding gene: 41408807

Following gene: 41408805

Centisome position: 63.04

GC content: 74.71

Gene sequence:

>522_bases
GTGAGCGCCCCGCGGATCGGGGTGCTGGCGCTGCAGGGCGACACCCGCGAGCATCTGGCCGCGCTGCGCGAGGCCGGGGC
CGAGTCGATGCCGGTGCGCCGCCGCGGCGAGCTCGAGGCGGTCGACGGGCTGGTCATTCCCGGCGGGGAATCGACCACCA
TGAGCCACCTGCTCAAAGACCTCGACCTGCTGGAGCCGCTGCGGGGGCTGCTGGCCGACGGGCTGCCCGCCTACGGCGCC
TGCGCCGGGATGATCCTGCTGGCCAGCGAGATCCTGGACGCCGGCGCCGGCGGGCGGGAGGCGCTGCCGCTGCGGGCGAT
CGATATGACGGTGCGCCGCAATGCTTTTGGACGCCAGGTCGACTCGTTCGAGGGTGACATCGCGTTCGCGGGACTGGACG
GGCCGGTGCGCGCGGTGTTCATCCGCGCGCCCTGGGTGGAGCGCGCCGGCGACGGCGTCGAGGTGCTGGCCCGCGCCGCC
GGTCACGTCGTCGCGGTCGCCGGAATCGAGCCCGACGCGTGA

Upstream 100 bases:

>100_bases
GCCGCTCGCTGTGCCAGGGCAAGATCTTCACCCAGTCCGGCGAGATGGTGGCCGCGGTCATGCAGGAGGGGCTGACCCGC
TTCCAGCGGGGATATCGGCA

Downstream 100 bases:

>100_bases
ACCACCTCCTGGTGCTCTCGGGTGCGGTGGCCGACGGCGCACCGCACCACACCGGACCCGACTTCGGCAAGGCCAGCCCG
GTCGGGCTGCTGATCGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSAPRIGVLALQGDTREHLAALREAGAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKDLDLLEPLRGLLADGLPAYGA
CAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQVDSFEGDIAFAGLDGPVRAVFIRAPWVERAGDGVEVLARAA
GHVVAVAGIEPDA

Sequences:

>Translated_173_residues
MSAPRIGVLALQGDTREHLAALREAGAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKDLDLLEPLRGLLADGLPAYGA
CAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQVDSFEGDIAFAGLDGPVRAVFIRAPWVERAGDGVEVLARAA
GHVVAVAGIEPDA
>Mature_172_residues
SAPRIGVLALQGDTREHLAALREAGAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKDLDLLEPLRGLLADGLPAYGAC
AGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQVDSFEGDIAFAGLDGPVRAVFIRAPWVERAGDGVEVLARAAG
HVVAVAGIEPDA

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=194, Percent_Identity=32.9896907216495, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323995, Length=176, Percent_Identity=33.5227272727273, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321048, Length=174, Percent_Identity=32.183908045977, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 18013; Mature: 17882

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPRIGVLALQGDTREHLAALREAGAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKD
CCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEECCCCCHHHHHHHHH
LDLLEPLRGLLADGLPAYGACAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
DSFEGDIAFAGLDGPVRAVFIRAPWVERAGDGVEVLARAAGHVVAVAGIEPDA
CCCCCCEEEECCCCCEEEEEEECCCHHHCCCHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
SAPRIGVLALQGDTREHLAALREAGAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKD
CCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEECCCCCHHHHHHHHH
LDLLEPLRGLLADGLPAYGACAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
DSFEGDIAFAGLDGPVRAVFIRAPWVERAGDGVEVLARAAGHVVAVAGIEPDA
CCCCCCEEEECCCCCEEEEEEECCCHHHCCCHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA